About lab
This a model from the article: Constancy and variability of contractile efficiency as a function of calcium andcross-bridge kinetics: simulation. Yamaguchi H, Takaki M, Matsubara H, Yasuhara S, Suga H.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
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Metadata
Packageyamaguchi1996-myocardialca2-lab
Created2026-05-17
Updated2026-05-17
cardiovascularphysiologysystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_tn_ca",
"label": "Initial Tn Ca",
"maps_to": "systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model.initial_tn_ca",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `TnCa`."
},
{
"name": "initial_model_state_fti",
"label": "Initial Model State Fti",
"maps_to": "systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model.initial_model_state_fti",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `FTI`."
},
{
"name": "initial_cum_cb_on",
"label": "Initial Cum Cb On",
"maps_to": "systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model.initial_cum_cb_on",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `CumCB_on`."
},
{
"name": "initial_cum_cb_off",
"label": "Initial Cum Cb Off",
"maps_to": "systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model.initial_cum_cb_off",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `CumCB_off`."
},
{
"name": "initial_cb_on",
"label": "Initial Cb On",
"maps_to": "systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model.initial_cb_on",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `CB_on`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model.species_labels"
},
{
"name": "tn_ca",
"maps_to": "systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model.tn_ca"
},
{
"name": "fti",
"maps_to": "systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model.fti"
},
{
"name": "cum_cb_on",
"maps_to": "systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model.cum_cb_on"
},
{
"name": "cum_cb_off",
"maps_to": "systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model.cum_cb_off"
},
{
"name": "cb_on",
"maps_to": "systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model.cb_on"
}
]
},
"tags": [
"cardiovascular",
"physiology",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Yamaguchi1996 Myocardialca2 Lab",
"models": [
{
"path": "owned/models/systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model",
"alias": "systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model",
"provenance": {
"owned_path": "owned/models/systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model_state"
],
"from": "systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model_summary"
],
"from": "systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model_species_labels"
],
"from": "systemsbiology_sbml_yamaguchi1996_myocardialca2_model1006230032_model.species_labels"
}
],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "This a model from the article: Constancy and variability of contractile efficiency as a function of calcium andcross-bridge kinetics: simulation. Yamaguchi H, Takaki M, Matsubara H, Yasuhara S, Suga H.",
"schema_version": "2.0"
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