About lab
This model is taken from the <a href = 'http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=10493814&query_hl=10&itool=pubmed_docsum. It can be used to explore systemsbiology abu soud1999 noharginine model9088294310 dynamics and compare simulation behavior across conditions.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packageabu-soud1999-noharginine-lab
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_noh_minus_arginine",
"label": "Initial Noh Minus Arginine",
"maps_to": "systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model.initial_noh_minus_arginine",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `NOH_minus_Arginine`."
},
{
"name": "initial_im_minus_nnos",
"label": "Initial Im Minus Nnos",
"maps_to": "systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model.initial_im_minus_nnos",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Im_minus_nNOS`."
},
{
"name": "initial_imidazole",
"label": "Initial Imidazole",
"maps_to": "systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model.initial_imidazole",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Imidazole`."
},
{
"name": "initial_nnos_minus_noh_minus_arginine",
"label": "Initial Nnos Minus Noh Minus Arginine",
"maps_to": "systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model.initial_nnos_minus_noh_minus_arginine",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `nNOS_minus_NOH_minus_Arginine`."
},
{
"name": "initial_im_minus_nnos_minus_noh_minus_arginine",
"label": "Initial Im Minus Nnos Minus Noh Minus Arginine",
"maps_to": "systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model.initial_im_minus_nnos_minus_noh_minus_arginine",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Im_minus_nNOS_minus_NOH_minus_Arginine`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model.species_labels"
},
{
"name": "noh_minus_arginine",
"maps_to": "systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model.noh_minus_arginine"
},
{
"name": "im_minus_nnos",
"maps_to": "systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model.im_minus_nnos"
},
{
"name": "imidazole",
"maps_to": "systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model.imidazole"
},
{
"name": "nnos_minus_noh_minus_arginine",
"maps_to": "systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model.nnos_minus_noh_minus_arginine"
},
{
"name": "im_minus_nnos_minus_noh_minus_arginine",
"maps_to": "systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model.im_minus_nnos_minus_noh_minus_arginine"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Abu Soud1999 Noharginine Lab",
"models": [
{
"path": "owned/models/systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model",
"alias": "systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model",
"provenance": {
"owned_path": "owned/models/systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model_state"
],
"from": "systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model_summary"
],
"from": "systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model_species_labels"
],
"from": "systemsbiology_sbml_abu_soud1999_noharginine_model9088294310_model.species_labels"
}
],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "This model is taken from the <a href = 'http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=10493814&query_hl=10&itool=pubmed_docsum. It can be used to explore systemsbiology abu soud1999 noharginine model9088294310 dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
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