BiosimulantBiosimulant
Docs
Search labs...
Sign inGet Started

Wodarz2007 - HIV/CD4 T-cell interaction Lab

About lab

Wodarz2007 - HIV/CD4 T-cell interaction A deterministic model illustrating howCD4 T-cells can influence HIV infection. This model is described in the article: Infection dynamics in HIV-specific CD4 T.

Runtime

Duration10
Comms Step1

Runs

Total0
Completed0
Failed0

Metadata

Packagewodarz2007-hiv-cd4-t-cell-interaction-lab
Created2026-05-15
Updated2026-05-15
immunologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_t_cell_infected",
        "label": "Initial T Cell Infected",
        "units": "native source value",
        "default": 0.1,
        "maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.initial_t_cell_infected",
        "description": "Initial T Cell Infected. Sets the initial value of bundled SBML species `x`."
      },
      {
        "name": "initial_t_cell_uninfected",
        "label": "Initial T Cell Uninfected",
        "units": "native source value",
        "default": 0,
        "maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.initial_t_cell_uninfected",
        "description": "Initial T Cell Uninfected. Sets the initial value of bundled SBML species `y`."
      },
      {
        "name": "initial_free_virus",
        "label": "Initial Free Virus",
        "units": "native source value",
        "default": 1,
        "maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.initial_free_virus",
        "description": "Initial Free Virus. Sets the initial value of bundled SBML species `v`."
      },
      {
        "name": "uninfected_t_cell_death_rate",
        "label": "Uninfected T Cell Death Rate",
        "units": "native source value",
        "default": 0.1,
        "maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.uninfected_t_cell_death_rate",
        "description": "Uninfected T Cell Death Rate. Sets bundled SBML parameter `d`."
      }
    ],
    "outputs": [
      {
        "name": "t_cell_infected",
        "maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.t_cell_infected"
      },
      {
        "name": "t_cell_uninfected",
        "maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.t_cell_uninfected"
      },
      {
        "name": "free_virus",
        "maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.free_virus"
      },
      {
        "name": "state",
        "maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.state"
      },
      {
        "name": "summary",
        "maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.species_labels"
      }
    ]
  },
  "title": "Wodarz2007 - HIV/CD4 T-cell interaction Lab",
  "models": [
    {
      "path": "owned/models/immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model",
      "alias": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model",
      "provenance": {
        "owned_path": "owned/models/immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model_state"
      ],
      "from": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.state"
    },
    {
      "to": [
        "visualisation.immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model_summary"
      ],
      "from": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.summary"
    },
    {
      "to": [
        "visualisation.immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model_species_labels"
      ],
      "from": "immunology_sbml_wodarz2007_hiv_cd4_t_cell_interaction_biomd0000000663_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "Wodarz2007 - HIV/CD4 T-cell interaction A deterministic model illustrating howCD4 T-cells can influence HIV infection. This model is described in the article: Infection dynamics in HIV-specific CD4 T.",
  "schema_version": "2.0"
}

Sign in to start your own run. Public-lab history stays visible here.

Select a run from History to view its results.