Shorten2007 - Mathematical Fatigue Skeletal Muscle Force Contraction Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_intracellular_sodium",
        "label": "Initial Intracellular Sodium",
        "maps_to": "physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model.initial_intracellular_sodium",
        "description": "Initial value for Intracellular Sodium. Maps to source symbol `Na_i`. Units: milliM. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "milliM"
        ]
      },
      {
        "name": "initial_intracellular_potassium",
        "label": "Initial Intracellular Potassium",
        "maps_to": "physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model.initial_intracellular_potassium",
        "description": "Initial value for Intracellular Potassium. Maps to source symbol `K_i`. Units: milliM. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "milliM"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model.variable_labels"
      },
      {
        "name": "membrane_voltage",
        "label": "Membrane Voltage",
        "maps_to": "physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model.membrane_voltage",
        "description": "Membrane Voltage. Maps to source symbol `V_m`. Units: millivolt. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "sodium_current",
        "label": "Sodium Current",
        "maps_to": "physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model.sodium_current",
        "description": "Sodium Current. Maps to source symbol `I_NaK`. Units: microA_per_cm2. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "sodium_current_i_na",
        "label": "Sodium Current I Na",
        "maps_to": "physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model.sodium_current_i_na",
        "description": "Sodium Current I Na. Maps to source symbol `I_Na`. Units: microA_per_cm2. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "sodium_current_i_na_k_bar",
        "label": "Sodium Current I Na K Bar",
        "maps_to": "physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model.sodium_current_i_na_k_bar",
        "description": "Sodium Current I Na K Bar. Maps to source symbol `I_NaK_bar`. Units: microA_per_cm2. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "sodium_current_i_na_k_bar_t",
        "label": "Sodium Current I Na K Bar T",
        "maps_to": "physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model.sodium_current_i_na_k_bar_t",
        "description": "Sodium Current I Na K Bar T. Maps to source symbol `I_NaK_bar_t`. Units: microA_per_cm2. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "sodium_current_i_na_k_t",
        "label": "Sodium Current I Na K T",
        "maps_to": "physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model.sodium_current_i_na_k_t",
        "description": "Sodium Current I Na K T. Maps to source symbol `I_NaK_t`. Units: microA_per_cm2. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Shorten2007 - Mathematical Fatigue Skeletal Muscle Force Contraction Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model",
      "alias": "physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model",
      "parameters": {
        "model_path": "data/shorten_ocallaghan_davidson_soboleva_2007.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model_state"
      ],
      "from": "physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model_summary"
      ],
      "from": "physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model_trajectory"
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      "from": "physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model_variable_labels"
      ],
      "from": "physiology_cellml_shorten_ocallaghan_davidson_soboleva_2007_shortenocallaghandavidsonsoboleva2007_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Shorten, Ocallaghan, Davidson, Soboleva, 2007. Public controls and outputs are mapped to real source symbols for calcium handling.",
  "schema_version": "2.0"
}