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Saeidi2012 Quorum Sensing Device That Produces Gfp Lab

About lab

Saeidi2012 - Quorum sensing device that produces GFP Saeidi et al. (2012) has modelled a quorum sensing device that produces green fluorescent protein (GFP) as reporter in the presence of Acyl Homoser.

Runtime

Duration1
Comms Step0.1

Runs

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Completed0
Failed0

Metadata

Packagesaeidi2012-quorum-sensing-device-that-produces-gfp-lab
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
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        "name": "initial_p_lux_r",
        "label": "Initial P Lux R",
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        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s16`."
      },
      {
        "name": "initial_ptet_las_r",
        "label": "Initial Ptet Las R",
        "maps_to": "systemsbiology_sbml_saeidi2012_quorum_sensing_device_that_produces_g_biomd0000000438_model.initial_ptet_las_r",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s1`."
      },
      {
        "name": "initial_model_state_3_oc12_hsl",
        "label": "Initial Model State 3 Oc12 Hsl",
        "maps_to": "systemsbiology_sbml_saeidi2012_quorum_sensing_device_that_produces_g_biomd0000000438_model.initial_model_state_3_oc12_hsl",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s4`."
      },
      {
        "name": "initial_las_r",
        "label": "Initial Las R",
        "maps_to": "systemsbiology_sbml_saeidi2012_quorum_sensing_device_that_produces_g_biomd0000000438_model.initial_las_r",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s19`."
      },
      {
        "name": "initial_sa6_degraded",
        "label": "Initial SA6 Degraded",
        "maps_to": "systemsbiology_sbml_saeidi2012_quorum_sensing_device_that_produces_g_biomd0000000438_model.initial_sa6_degraded",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s5`."
      },
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        "name": "initial_sa3_degraded",
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        "maps_to": "systemsbiology_sbml_saeidi2012_quorum_sensing_device_that_produces_g_biomd0000000438_model.initial_sa3_degraded",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s3`."
      }
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      {
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        "maps_to": "systemsbiology_sbml_saeidi2012_quorum_sensing_device_that_produces_g_biomd0000000438_model.state"
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        "name": "species_labels",
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        "maps_to": "systemsbiology_sbml_saeidi2012_quorum_sensing_device_that_produces_g_biomd0000000438_model.p_lux_r"
      },
      {
        "name": "ptet_las_r",
        "maps_to": "systemsbiology_sbml_saeidi2012_quorum_sensing_device_that_produces_g_biomd0000000438_model.ptet_las_r"
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        "maps_to": "systemsbiology_sbml_saeidi2012_quorum_sensing_device_that_produces_g_biomd0000000438_model.model_state_3_oc12_hsl"
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      },
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        "maps_to": "systemsbiology_sbml_saeidi2012_quorum_sensing_device_that_produces_g_biomd0000000438_model.sa3_degraded"
      }
    ]
  },
  "tags": [
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Saeidi2012 Quorum Sensing Device That Produces Gfp Lab",
  "models": [
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  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Saeidi2012 - Quorum sensing device that produces GFP Saeidi et al. (2012) has modelled a quorum sensing device that produces green fluorescent protein (GFP) as reporter in the presence of Acyl Homoser.",
  "schema_version": "2.0"
}

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