Nitin2023- Kinetic model of cellular metabolism Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_metabolic_pathway_state_1",
        "units": "native SBML value",
        "default": 20000,
        "maps_to": "metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model.initial_metabolic_pathway_state_1",
        "description": "Initial condition for metabolic pathway state 1. Maps to bundled SBML symbol `mw3a3264af_63ed_4289_a17a_a14fb9d67eff`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from bundled SBML initial value."
      },
      {
        "name": "initial_metabolic_pathway_state_2",
        "units": "native SBML value",
        "default": 0,
        "maps_to": "metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model.initial_metabolic_pathway_state_2",
        "description": "Initial condition for metabolic pathway state 2. Maps to bundled SBML symbol `mw76465d1e_cf23_4b01_8554_20dd288edbd4`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from bundled SBML initial value."
      },
      {
        "name": "initial_metabolic_pathway_state_3",
        "units": "native SBML value",
        "default": 0,
        "maps_to": "metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model.initial_metabolic_pathway_state_3",
        "description": "Initial condition for metabolic pathway state 3. Maps to bundled SBML symbol `mwf28b5b41_dded_4f05_85a9_31b845b5a48d`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from bundled SBML initial value."
      },
      {
        "name": "initial_observable_2dg",
        "units": "native SBML value",
        "default": 0,
        "maps_to": "metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model.initial_observable_2dg",
        "description": "Initial condition for observable 2dg. Maps to bundled SBML symbol `mw74dc94dc_3350_40dc_8283_cf793630d973`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from bundled SBML initial value."
      },
      {
        "name": "initial_metabolic_pathway_state_5",
        "units": "native SBML value",
        "default": 0,
        "maps_to": "metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model.initial_metabolic_pathway_state_5",
        "description": "Initial condition for metabolic pathway state 5. Maps to bundled SBML symbol `mwb94475cd_d488_489d_b1fc_5b2ae6fb2aca`. Applied before the Tellurium simulation starts; this does not change kinetic parameters or equations. Default from bundled SBML initial value."
      }
    ],
    "outputs": [
      {
        "name": "metabolic_pathway_state_1",
        "maps_to": "metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model.metabolic_pathway_state_1"
      },
      {
        "name": "metabolic_pathway_state_2",
        "maps_to": "metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model.metabolic_pathway_state_2"
      },
      {
        "name": "metabolic_pathway_state_3",
        "maps_to": "metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model.metabolic_pathway_state_3"
      },
      {
        "name": "observable_2dg",
        "maps_to": "metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model.observable_2dg"
      },
      {
        "name": "metabolic_pathway_state_5",
        "maps_to": "metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model.metabolic_pathway_state_5"
      },
      {
        "name": "observable_values",
        "maps_to": "metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model.observable_values"
      },
      {
        "name": "run_summary",
        "maps_to": "metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model.run_summary"
      },
      {
        "name": "observable_labels",
        "maps_to": "metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model.observable_labels"
      }
    ]
  },
  "title": "Nitin2023- Kinetic model of cellular metabolism Lab",
  "models": [
    {
      "path": "owned/models/metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model",
      "alias": "metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model",
      "parameters": {
        "model_path": "data/MODEL2312220001.sbml",
        "integration_step": 0.1
      },
      "provenance": {
        "owned_path": "owned/models/metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model_observable_values"
      ],
      "from": "metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model.observable_values"
    },
    {
      "to": [
        "visualisation.metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model_run_summary"
      ],
      "from": "metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model.run_summary"
    },
    {
      "to": [
        "visualisation.metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model_observable_labels"
      ],
      "from": "metabolism_sbml_nitin2023_kinetic_model_of_cellular_metabolism_model2312220001_model.observable_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "A simplistic numerical model designed to simulate and augment the commercially available real-time, in-vitro, end-point kinetic glycolysis assay with and without pathway-modulating drugs to extend the. It can be used to explore metabolic flux dynamics and compare pathway behavior across conditions.",
  "schema_version": "2.0"
}