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Masison2024 Enterocyte Iron Mucosal Block Lab

About lab

Enterocyte Iron Mucosal Block This is a model of enterocyte iron absorption, consisting of iron uptake (movement of iron from intestinal lumen into cytplasm), and transfer (transport of iron from cyto. It can be used to explore systemsbiology masison2024 enterocyte iron mucosal block dynamics and compare simulation behavior across conditions.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagemasison2024-enterocyte-iron-mucosal-block-lab
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "dose_0",
        "label": "Dose 0",
        "maps_to": "systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model.dose_0",
        "description": "Source parameter exposed because its SBML label indicates a boundary, stimulus, dose, ligand, protocol, substrate, or environmental control. Maps to SBML symbol `dose_0`."
      },
      {
        "name": "dose_fe",
        "label": "Dose Fe",
        "maps_to": "systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model.dose_fe",
        "description": "Source parameter exposed because its SBML label indicates a boundary, stimulus, dose, ligand, protocol, substrate, or environmental control. Maps to SBML symbol `dose_fe`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model.species_labels"
      },
      {
        "name": "fpn_internalized",
        "maps_to": "systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model.fpn_internalized"
      },
      {
        "name": "core",
        "maps_to": "systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model.core"
      },
      {
        "name": "fe_lumen",
        "maps_to": "systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model.fe_lumen"
      },
      {
        "name": "fe_blood",
        "maps_to": "systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model.fe_blood"
      },
      {
        "name": "ft_cage",
        "maps_to": "systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model.ft_cage"
      },
      {
        "name": "ir_ps_active",
        "maps_to": "systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model.ir_ps_active"
      }
    ]
  },
  "tags": [
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Masison2024 Enterocyte Iron Mucosal Block Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model",
      "alias": "systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model_state"
      ],
      "from": "systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model_summary"
      ],
      "from": "systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model_species_labels"
      ],
      "from": "systemsbiology_sbml_masison2024_enterocyte_iron_mucosal_block_model2405170001_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Enterocyte Iron Mucosal Block This is a model of enterocyte iron absorption, consisting of iron uptake (movement of iron from intestinal lumen into cytplasm), and transfer (transport of iron from cyto. It can be used to explore systemsbiology masison2024 enterocyte iron mucosal block dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

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