About lab
Its a Deterministic ODE model showcasing mechanism of PDL1 induced TCR and CD38 signalling inhibition. The model also contains the LCK activation and inactivation phenomenon dependent on the particula.
Runtime
Duration10
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packagetheinmozhi2018-mechanism-of-pd1-inhibiting-tcr-signaling-in-tumo
Created2026-05-15
Updated2026-05-15
immunologysbmlbiomodels_ebifaithfulcuratedvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_lcki",
"label": "Initial Lcki",
"units": "native source value",
"default": 25,
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.initial_lcki",
"description": "Initial Lcki. Sets the initial value of bundled SBML species `LCKi`."
},
{
"name": "initial_lckyi",
"label": "Initial Lckyi",
"units": "native source value",
"default": 25,
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.initial_lckyi",
"description": "Initial Lckyi. Sets the initial value of bundled SBML species `LCKyi`."
},
{
"name": "initial_lckya",
"label": "Initial Lckya",
"units": "native source value",
"default": 25,
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.initial_lckya",
"description": "Initial Lckya. Sets the initial value of bundled SBML species `LCKya`."
},
{
"name": "initial_lckyiya",
"label": "Initial Lckyiya",
"units": "native source value",
"default": 25,
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.initial_lckyiya",
"description": "Initial Lckyiya. Sets the initial value of bundled SBML species `LCKyiya`."
},
{
"name": "initial_lckpi",
"label": "Initial Lckpi",
"units": "native source value",
"default": 0,
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.initial_lckpi",
"description": "Initial Lckpi. Sets the initial value of bundled SBML species `LCKpi`."
}
],
"outputs": [
{
"name": "lcki",
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.lcki"
},
{
"name": "lckyi",
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.lckyi"
},
{
"name": "lckya",
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.lckya"
},
{
"name": "lckyiya",
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.lckyiya"
},
{
"name": "lckpi",
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.lckpi"
},
{
"name": "state",
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.state"
},
{
"name": "summary",
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.summary"
},
{
"name": "species_labels",
"maps_to": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.species_labels"
}
]
},
"title": "Theinmozhi2018 - Mechanism of PD1 inhibiting TCR signaling in Tumor immune regulation Lab",
"models": [
{
"path": "owned/models/immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model",
"alias": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model",
"provenance": {
"owned_path": "owned/models/immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model_state"
],
"from": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.state"
},
{
"to": [
"visualisation.immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model_summary"
],
"from": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.summary"
},
{
"to": [
"visualisation.immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model_species_labels"
],
"from": "immunology_sbml_theinmozhi2018_mechanism_of_pd1_inhibiting_tcr_s_biomd0000000724_model.species_labels"
}
],
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"description": "Its a Deterministic ODE model showcasing mechanism of PDL1 induced TCR and CD38 signalling inhibition. The model also contains the LCK activation and inactivation phenomenon dependent on the particula.",
"schema_version": "2.0"
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