About lab
Clean Biosimulant lab for metabolic and hormone-linked signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagebr-nnmark2013-insulin-signalling-in-human-adipocytes-diabetic-co
Created2026-05-16
Updated2026-05-16
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebimetabolic-signalinghormone-signalingvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_insulin_level",
"label": "Insulin",
"maps_to": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.initial_insulin_level",
"description": "Insulin source parameter. Maps to SBML symbol `insulin` and preserves the bundled default."
},
{
"name": "initial_scale_glucose_level",
"label": "Scale GLUCOSE",
"maps_to": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.initial_scale_glucose_level",
"description": "Scale GLUCOSE source parameter. Maps to SBML symbol `scaleGLUCOSE` and preserves the bundled default."
}
],
"outputs": [
{
"name": "phosphorylated_insulin_receptor",
"label": "phosphorylated insulin receptor",
"maps_to": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.phosphorylated_insulin_receptor",
"description": "phosphorylated insulin receptor. Maps to SBML symbol `IRp` and is emitted in native SBML units."
},
{
"name": "insulin_bound_insulin_receptor",
"label": "insulin-bound insulin receptor",
"maps_to": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.insulin_bound_insulin_receptor",
"description": "insulin-bound insulin receptor. Maps to SBML symbol `IRins` and is emitted in native SBML units."
},
{
"name": "internalized_phosphorylated_insulin_receptor",
"label": "internalized phosphorylated insulin receptor",
"maps_to": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.internalized_phosphorylated_insulin_receptor",
"description": "internalized phosphorylated insulin receptor. Maps to SBML symbol `IRip` and is emitted in native SBML units."
},
{
"name": "state",
"label": "Observable state",
"maps_to": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.summary"
},
{
"name": "species_labels",
"label": "Observable labels",
"maps_to": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.species_labels"
}
]
},
"tags": [
"signaling",
"systems",
"systems-biology",
"sbml",
"faithful",
"biomodels_ebi",
"metabolic-signaling",
"hormone-signaling"
],
"title": "Brännmark2013 - Insulin signalling in human adipocytes (diabetic condition) Lab",
"models": [
{
"path": "owned/models/signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model",
"alias": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model",
"provenance": {
"owned_path": "owned/models/signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model_state"
],
"from": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.state"
},
{
"to": [
"visualisation.signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model_summary"
],
"from": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.summary"
},
{
"to": [
"visualisation.signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model_species_labels"
],
"from": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.species_labels"
}
],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "Clean Biosimulant lab for metabolic and hormone-linked signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
"schema_version": "2.0"
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