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Brännmark2013 - Insulin signalling in human adipocytes (diabetic condition) Lab

About lab

Clean Biosimulant lab for metabolic and hormone-linked signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagebr-nnmark2013-insulin-signalling-in-human-adipocytes-diabetic-co
Created2026-05-16
Updated2026-05-16
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebimetabolic-signalinghormone-signalingvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_insulin_level",
        "label": "Insulin",
        "maps_to": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.initial_insulin_level",
        "description": "Insulin source parameter. Maps to SBML symbol `insulin` and preserves the bundled default."
      },
      {
        "name": "initial_scale_glucose_level",
        "label": "Scale GLUCOSE",
        "maps_to": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.initial_scale_glucose_level",
        "description": "Scale GLUCOSE source parameter. Maps to SBML symbol `scaleGLUCOSE` and preserves the bundled default."
      }
    ],
    "outputs": [
      {
        "name": "phosphorylated_insulin_receptor",
        "label": "phosphorylated insulin receptor",
        "maps_to": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.phosphorylated_insulin_receptor",
        "description": "phosphorylated insulin receptor. Maps to SBML symbol `IRp` and is emitted in native SBML units."
      },
      {
        "name": "insulin_bound_insulin_receptor",
        "label": "insulin-bound insulin receptor",
        "maps_to": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.insulin_bound_insulin_receptor",
        "description": "insulin-bound insulin receptor. Maps to SBML symbol `IRins` and is emitted in native SBML units."
      },
      {
        "name": "internalized_phosphorylated_insulin_receptor",
        "label": "internalized phosphorylated insulin receptor",
        "maps_to": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.internalized_phosphorylated_insulin_receptor",
        "description": "internalized phosphorylated insulin receptor. Maps to SBML symbol `IRip` and is emitted in native SBML units."
      },
      {
        "name": "state",
        "label": "Observable state",
        "maps_to": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation summary",
        "maps_to": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.summary"
      },
      {
        "name": "species_labels",
        "label": "Observable labels",
        "maps_to": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.species_labels"
      }
    ]
  },
  "tags": [
    "signaling",
    "systems",
    "systems-biology",
    "sbml",
    "faithful",
    "biomodels_ebi",
    "metabolic-signaling",
    "hormone-signaling"
  ],
  "title": "Brännmark2013 - Insulin signalling in human adipocytes (diabetic condition) Lab",
  "models": [
    {
      "path": "owned/models/signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model",
      "alias": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model",
      "provenance": {
        "owned_path": "owned/models/signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model_state"
      ],
      "from": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.state"
    },
    {
      "to": [
        "visualisation.signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model_summary"
      ],
      "from": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.summary"
    },
    {
      "to": [
        "visualisation.signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model_species_labels"
      ],
      "from": "signaling_sbml_br_nnmark2013_insulin_signalling_in_human_adipoc_biomd0000000449_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Clean Biosimulant lab for metabolic and hormone-linked signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
  "schema_version": "2.0"
}

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