About lab
Clean Biosimulant lab for cell-cycle regulatory signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.
Runtime
Duration1
Comms Step0.1
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Metadata
Packagearaujo2016-positive-feedback-in-cdk1-signalling
Created2026-05-16
Updated2026-06-13
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebicell-cycle-signalingvisualisationother
Manifest
{
"io": {
"inputs": [
{
"name": "initial_cdk1cyc_b",
"label": "Initial Cdk1cyc B",
"maps_to": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.initial_cdk1cyc_b",
"description": "Initial level of Cdk1cyc B. Maps to SBML symbol `Cdk1CycB`; exposed as a traceable initial-condition perturbation."
}
],
"outputs": [
{
"name": "cdk1cyc_b",
"label": "Cdk1cyc B",
"maps_to": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.cdk1cyc_b",
"description": "Cdk1cyc B. Maps to SBML symbol `Cdk1CycB` and is emitted in native SBML units."
},
{
"name": "source_defined_apc_state",
"label": "source-defined APC state",
"maps_to": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.source_defined_apc_state",
"description": "source-defined APC state. Maps to SBML symbol `APC` and is emitted in native SBML units."
},
{
"name": "source_defined_cycb_state",
"label": "source-defined CYCB state",
"maps_to": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.source_defined_cycb_state",
"description": "source-defined CYCB state. Maps to SBML symbol `CycB` and is emitted in native SBML units."
},
{
"name": "state",
"label": "Observable state",
"maps_to": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.summary"
},
{
"name": "species_labels",
"label": "Observable labels",
"maps_to": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.species_labels"
}
]
},
"tags": [
"signaling",
"systems",
"systems-biology",
"sbml",
"faithful",
"biomodels_ebi",
"cell-cycle-signaling"
],
"title": "Araujo2016 - Positive feedback in Cdk1 signalling keeps mitotic duration short and constant Lab",
"models": [
{
"path": "models/core",
"alias": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model_state"
],
"from": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.state"
},
{
"to": [
"visualisation.signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model_summary"
],
"from": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.summary"
},
{
"to": [
"visualisation.signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model_species_labels"
],
"from": "signaling_sbml_araujo2016_positive_feedback_in_cdk1_signalling_biomd0000000657_model.species_labels"
}
],
"package": "araujo2016-positive-feedback-in-cdk1-signalling",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "Clean Biosimulant lab for cell-cycle regulatory signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
"schema_version": "2.0"
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