Perelson1993 - Dynamics Hiv Infection T Cells 1 Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_viral_quantity_v",
        "label": "Initial Viral Quantity V (source V)",
        "maps_to": "physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model.initial_viral_quantity_v",
        "description": "Initial value for Viral Quantity V (source V). Maps to source symbol `V`. Units: per_mm3. Naming evidence: viral/infection context supports a conservative viral quantity label.",
        "accepted_units": [
          "per_mm3"
        ]
      },
      {
        "name": "initial_density_state_t_1",
        "label": "Initial Density State T 1 (source T_1)",
        "maps_to": "physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model.initial_density_state_t_1",
        "description": "Initial value for Density State T 1 (source T_1). Maps to source symbol `T_1`. Units: per_mm3. Naming evidence: density-like units identify a concentration or density state.",
        "accepted_units": [
          "per_mm3"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model.variable_labels"
      },
      {
        "name": "viral_quantity_v",
        "label": "Viral Quantity V (source V)",
        "maps_to": "physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model.viral_quantity_v",
        "description": "Viral Quantity V (source V). Maps to source symbol `V`. Units: per_mm3. Naming evidence: viral/infection context supports a conservative viral quantity label."
      },
      {
        "name": "free_virus_particle_n",
        "label": "Free Virus Particle N",
        "maps_to": "physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model.free_virus_particle_n",
        "description": "Free Virus Particle N. Maps to source symbol `N`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "mu_v",
        "label": "Mu V",
        "maps_to": "physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model.mu_v",
        "description": "Mu V. Maps to source symbol `mu_V`. Units: per_day. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "density_state_t_1",
        "label": "Density State T 1 (source T_1)",
        "maps_to": "physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model.density_state_t_1",
        "description": "Density State T 1 (source T_1). Maps to source symbol `T_1`. Units: per_mm3. Naming evidence: density-like units identify a concentration or density state."
      },
      {
        "name": "density_state_t_2",
        "label": "Density State T 2 (source T_2)",
        "maps_to": "physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model.density_state_t_2",
        "description": "Density State T 2 (source T_2). Maps to source symbol `T_2`. Units: per_mm3. Naming evidence: density-like units identify a concentration or density state."
      },
      {
        "name": "uninfected_t",
        "label": "Uninfected T",
        "maps_to": "physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model.uninfected_t",
        "description": "Uninfected T. Maps to source symbol `T`. Units: per_mm3. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Perelson1993 - Dynamics Hiv Infection T Cells 1 Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model",
      "alias": "physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model",
      "parameters": {
        "model_path": "data/perelson_1993a.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model_state"
      ],
      "from": "physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model_summary"
      ],
      "from": "physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model_trajectory"
      ],
      "from": "physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model_variable_labels"
      ],
      "from": "physiology_cellml_perelson_1993_perelsonkirschnerdeboer1993_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Perelson 1993. Public controls and outputs are mapped to real source symbols for source-model physiology.",
  "schema_version": "2.0"
}