About lab
The model describes the mechanisms by which macrophages differentiate into a given phenotype. The model shows that both extracellular and intracellular signalling are both important for that process.
Runtime
Duration10
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packagefrank2021-macrophage-polarization-lab
Created2026-05-15
Updated2026-05-15
immunologysbmlbiomodels_ebifaithfulcuratedvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_unresolved_signaling_observable_1",
"label": "Initial Unresolved Signaling Observable 1",
"units": "native source value",
"default": 1.2,
"maps_to": "immunology_sbml_frank2021_macrophage_polarization_biomd0000001060_model.initial_unresolved_signaling_observable_1",
"description": "Initial Unresolved Signaling Observable 1. Sets the initial value of bundled SBML species `x1`."
},
{
"name": "initial_unresolved_signaling_observable_2",
"label": "Initial Unresolved Signaling Observable 2",
"units": "native source value",
"default": 2,
"maps_to": "immunology_sbml_frank2021_macrophage_polarization_biomd0000001060_model.initial_unresolved_signaling_observable_2",
"description": "Initial Unresolved Signaling Observable 2. Sets the initial value of bundled SBML species `x2`."
}
],
"outputs": [
{
"name": "unresolved_signaling_observable_1",
"maps_to": "immunology_sbml_frank2021_macrophage_polarization_biomd0000001060_model.unresolved_signaling_observable_1"
},
{
"name": "unresolved_signaling_observable_2",
"maps_to": "immunology_sbml_frank2021_macrophage_polarization_biomd0000001060_model.unresolved_signaling_observable_2"
},
{
"name": "state",
"maps_to": "immunology_sbml_frank2021_macrophage_polarization_biomd0000001060_model.state"
},
{
"name": "summary",
"maps_to": "immunology_sbml_frank2021_macrophage_polarization_biomd0000001060_model.summary"
},
{
"name": "species_labels",
"maps_to": "immunology_sbml_frank2021_macrophage_polarization_biomd0000001060_model.species_labels"
}
]
},
"title": "Frank2021 - Macrophage polarization Lab",
"models": [
{
"path": "owned/models/immunology_sbml_frank2021_macrophage_polarization_biomd0000001060_model",
"alias": "immunology_sbml_frank2021_macrophage_polarization_biomd0000001060_model",
"provenance": {
"owned_path": "owned/models/immunology_sbml_frank2021_macrophage_polarization_biomd0000001060_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.immunology_sbml_frank2021_macrophage_polarization_biomd0000001060_model_state"
],
"from": "immunology_sbml_frank2021_macrophage_polarization_biomd0000001060_model.state"
},
{
"to": [
"visualisation.immunology_sbml_frank2021_macrophage_polarization_biomd0000001060_model_summary"
],
"from": "immunology_sbml_frank2021_macrophage_polarization_biomd0000001060_model.summary"
},
{
"to": [
"visualisation.immunology_sbml_frank2021_macrophage_polarization_biomd0000001060_model_species_labels"
],
"from": "immunology_sbml_frank2021_macrophage_polarization_biomd0000001060_model.species_labels"
}
],
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"description": "The model describes the mechanisms by which macrophages differentiate into a given phenotype. The model shows that both extracellular and intracellular signalling are both important for that process.",
"schema_version": "2.0"
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