About lab
Source-faithful physiology lab for Ralser at el. 2007. Public controls and outputs are mapped to real source symbols for source-model physiology.
Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packageralser2007-dynamic-rerouting-carbohydrate-flux-lab
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother
Manifest
{
"io": {
"inputs": [
{
"name": "initial_nadp",
"label": "Initial Nadp",
"maps_to": "physiology_cellml_ralser_at_el_2007_32f_model.initial_nadp",
"description": "Initial value for Nadp. Maps to source symbol `NADP`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"mM"
]
},
{
"name": "initial_nadph",
"label": "Initial Nadph",
"maps_to": "physiology_cellml_ralser_at_el_2007_32f_model.initial_nadph",
"description": "Initial value for Nadph. Maps to source symbol `NADPH`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"mM"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_ralser_at_el_2007_32f_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_ralser_at_el_2007_32f_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_ralser_at_el_2007_32f_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_ralser_at_el_2007_32f_model.variable_labels"
},
{
"name": "nadp",
"label": "Nadp",
"maps_to": "physiology_cellml_ralser_at_el_2007_32f_model.nadp",
"description": "Nadp. Maps to source symbol `NADP`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "nadph",
"label": "Nadph",
"maps_to": "physiology_cellml_ralser_at_el_2007_32f_model.nadph",
"description": "Nadph. Maps to source symbol `NADPH`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "ci_pfkatp",
"label": "Ci Pfkatp",
"maps_to": "physiology_cellml_ralser_at_el_2007_32f_model.ci_pfkatp",
"description": "Ci Pfkatp. Maps to source symbol `CiPFKATP`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "cpfkatp",
"label": "Cpfkatp",
"maps_to": "physiology_cellml_ralser_at_el_2007_32f_model.cpfkatp",
"description": "Cpfkatp. Maps to source symbol `CPFKATP`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "katpase",
"label": "Katpase",
"maps_to": "physiology_cellml_ralser_at_el_2007_32f_model.katpase",
"description": "Katpase. Maps to source symbol `KATPASE`. Units: per_min. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "keq_ak",
"label": "Keq Ak",
"maps_to": "physiology_cellml_ralser_at_el_2007_32f_model.keq_ak",
"description": "Keq Ak. Maps to source symbol `KeqAK`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
}
]
},
"title": "Ralser2007 - Dynamic Rerouting Carbohydrate Flux Lab",
"models": [
{
"path": "owned/models/physiology_cellml_ralser_at_el_2007_32f_model",
"alias": "physiology_cellml_ralser_at_el_2007_32f_model",
"parameters": {
"model_path": "data/ralser_2007.cellml",
"integration_step": 0.01
},
"provenance": {
"owned_path": "owned/models/physiology_cellml_ralser_at_el_2007_32f_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_ralser_at_el_2007_32f_model_state"
],
"from": "physiology_cellml_ralser_at_el_2007_32f_model.state"
},
{
"to": [
"visualisation.physiology_cellml_ralser_at_el_2007_32f_model_summary"
],
"from": "physiology_cellml_ralser_at_el_2007_32f_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_ralser_at_el_2007_32f_model_trajectory"
],
"from": "physiology_cellml_ralser_at_el_2007_32f_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_ralser_at_el_2007_32f_model_variable_labels"
],
"from": "physiology_cellml_ralser_at_el_2007_32f_model.variable_labels"
}
],
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"description": "Source-faithful physiology lab for Ralser at el. 2007. Public controls and outputs are mapped to real source symbols for source-model physiology.",
"schema_version": "2.0"
}Sign in to start your own run. Public-lab history stays visible here.
Select a run from History to view its results.