Hermansen2015 - denovo biosynthesis of pyrimidines in yeast Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_source_defined_cp_state",
        "label": "Initial source-defined CP state",
        "maps_to": "signaling_sbml_hermansen2015_denovo_biosynthesis_of_pyrimidines_biomd0000000590_model.initial_source_defined_cp_state",
        "description": "Initial level of source-defined CP state. Maps to SBML symbol `cp`; exposed as a traceable initial-condition perturbation."
      }
    ],
    "outputs": [
      {
        "name": "calcium",
        "label": "calcium",
        "maps_to": "signaling_sbml_hermansen2015_denovo_biosynthesis_of_pyrimidines_biomd0000000590_model.calcium",
        "description": "calcium. Maps to SBML symbol `ca` and is emitted in native SBML units."
      },
      {
        "name": "dihydroorotate",
        "label": "dihydroorotate",
        "maps_to": "signaling_sbml_hermansen2015_denovo_biosynthesis_of_pyrimidines_biomd0000000590_model.dihydroorotate",
        "description": "dihydroorotate. Maps to SBML symbol `dho` and is emitted in native SBML units."
      },
      {
        "name": "orotate",
        "label": "orotate",
        "maps_to": "signaling_sbml_hermansen2015_denovo_biosynthesis_of_pyrimidines_biomd0000000590_model.orotate",
        "description": "orotate. Maps to SBML symbol `oro` and is emitted in native SBML units."
      },
      {
        "name": "state",
        "label": "Observable state",
        "maps_to": "signaling_sbml_hermansen2015_denovo_biosynthesis_of_pyrimidines_biomd0000000590_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation summary",
        "maps_to": "signaling_sbml_hermansen2015_denovo_biosynthesis_of_pyrimidines_biomd0000000590_model.summary"
      },
      {
        "name": "species_labels",
        "label": "Observable labels",
        "maps_to": "signaling_sbml_hermansen2015_denovo_biosynthesis_of_pyrimidines_biomd0000000590_model.species_labels"
      }
    ]
  },
  "tags": [
    "signaling",
    "systems",
    "systems-biology",
    "sbml",
    "faithful",
    "biomodels_ebi",
    "cellular-signaling"
  ],
  "title": "Hermansen2015 - denovo biosynthesis of pyrimidines in yeast Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "signaling_sbml_hermansen2015_denovo_biosynthesis_of_pyrimidines_biomd0000000590_model"
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.signaling_sbml_hermansen2015_denovo_biosynthesis_of_pyrimidines_biomd0000000590_model_state"
      ],
      "from": "signaling_sbml_hermansen2015_denovo_biosynthesis_of_pyrimidines_biomd0000000590_model.state"
    },
    {
      "to": [
        "visualisation.signaling_sbml_hermansen2015_denovo_biosynthesis_of_pyrimidines_biomd0000000590_model_summary"
      ],
      "from": "signaling_sbml_hermansen2015_denovo_biosynthesis_of_pyrimidines_biomd0000000590_model.summary"
    },
    {
      "to": [
        "visualisation.signaling_sbml_hermansen2015_denovo_biosynthesis_of_pyrimidines_biomd0000000590_model_species_labels"
      ],
      "from": "signaling_sbml_hermansen2015_denovo_biosynthesis_of_pyrimidines_biomd0000000590_model.species_labels"
    }
  ],
  "package": "hermansen2015-denovo-biosynthesis-of-pyrimidines",
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "version": "1.0.0",
  "description": "Clean Biosimulant lab for systems signaling model: Hermansen2015 - denovo biosynthesis of pyrimidines in yeast. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
  "schema_version": "2.0"
}