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Physiome 4f0 - Steady State Hmt Lab

About lab

Source-faithful physiology lab for Steady state HMT. Public controls and outputs are mapped to real source symbols for calcium handling.

Runtime

Duration0.01
Comms Step0.01
Settle Steps1

Runs

Total0
Completed0
Failed0

Metadata

Packagephysiome-4f0-steady-state-hmt-lab
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_ca_actn",
        "label": "Initial Ca Actn",
        "maps_to": "physiology_cellml_steady_state_hmt_4f0_model.initial_ca_actn",
        "description": "Initial value for Ca Actn. Maps to source symbol `Ca_actn`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "mM"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_steady_state_hmt_4f0_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_steady_state_hmt_4f0_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_steady_state_hmt_4f0_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_steady_state_hmt_4f0_model.variable_labels"
      },
      {
        "name": "ca_actn",
        "label": "Ca Actn",
        "maps_to": "physiology_cellml_steady_state_hmt_4f0_model.ca_actn",
        "description": "Ca Actn. Maps to source symbol `Ca_actn`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "active_contraction_t",
        "label": "Active Contraction T",
        "maps_to": "physiology_cellml_steady_state_hmt_4f0_model.active_contraction_t",
        "description": "Active Contraction T. Maps to source symbol `T`. Units: kPa. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "beta",
        "label": "Beta",
        "maps_to": "physiology_cellml_steady_state_hmt_4f0_model.beta",
        "description": "Beta. Maps to source symbol `beta`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "c50",
        "label": "C50",
        "maps_to": "physiology_cellml_steady_state_hmt_4f0_model.c50",
        "description": "C50. Maps to source symbol `c50`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "ca_max",
        "label": "Ca Max",
        "maps_to": "physiology_cellml_steady_state_hmt_4f0_model.ca_max",
        "description": "Ca Max. Maps to source symbol `Ca_max`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "interface_h",
        "label": "Interface H",
        "maps_to": "physiology_cellml_steady_state_hmt_4f0_model.interface_h",
        "description": "Interface H. Maps to source symbol `h`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Physiome 4f0 - Steady State Hmt Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_steady_state_hmt_4f0_model",
      "alias": "physiology_cellml_steady_state_hmt_4f0_model",
      "parameters": {
        "model_path": "data/1998_nash.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_steady_state_hmt_4f0_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_steady_state_hmt_4f0_model_state"
      ],
      "from": "physiology_cellml_steady_state_hmt_4f0_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_steady_state_hmt_4f0_model_summary"
      ],
      "from": "physiology_cellml_steady_state_hmt_4f0_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_steady_state_hmt_4f0_model_trajectory"
      ],
      "from": "physiology_cellml_steady_state_hmt_4f0_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_steady_state_hmt_4f0_model_variable_labels"
      ],
      "from": "physiology_cellml_steady_state_hmt_4f0_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Steady state HMT. Public controls and outputs are mapped to real source symbols for calcium handling.",
  "schema_version": "2.0"
}

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