About lab
Clean Biosimulant lab for systems signaling model: Maeda2006_MyosinPhosphorylation. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagemaeda2006-myosinphosphorylation-lab
Created2026-05-16
Updated2026-05-16
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebicoagulationvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_calcium_super_2_endsuper_ext",
"label": "Initial calcium Super 2 Endsuper Ext",
"maps_to": "signaling_sbml_maeda2006_myosinphosphorylation_biomd0000000088_model.initial_calcium_super_2_endsuper_ext",
"description": "Initial level of calcium Super 2 Endsuper Ext. Maps to SBML symbol `s267`; exposed as a traceable initial-condition perturbation."
},
{
"name": "initial_gdp",
"label": "Initial GDP",
"maps_to": "signaling_sbml_maeda2006_myosinphosphorylation_biomd0000000088_model.initial_gdp",
"description": "Initial level of GDP. Maps to SBML symbol `s50`; exposed as a traceable initial-condition perturbation."
},
{
"name": "initial_gtp",
"label": "Initial GTP",
"maps_to": "signaling_sbml_maeda2006_myosinphosphorylation_biomd0000000088_model.initial_gtp",
"description": "Initial level of GTP. Maps to SBML symbol `s48`; exposed as a traceable initial-condition perturbation."
}
],
"outputs": [
{
"name": "thrombin_r_active",
"label": "Thrombin R active",
"maps_to": "signaling_sbml_maeda2006_myosinphosphorylation_biomd0000000088_model.thrombin_r_active",
"description": "Thrombin R active. Maps to SBML symbol `s57` and is emitted in native SBML units."
},
{
"name": "rho_gef_active",
"label": "Rho GEF active",
"maps_to": "signaling_sbml_maeda2006_myosinphosphorylation_biomd0000000088_model.rho_gef_active",
"description": "Rho GEF active. Maps to SBML symbol `s245` and is emitted in native SBML units."
},
{
"name": "calcium_super_2_endsuper_calcium_m",
"label": "calcium Super 2 Endsuper calcium M",
"maps_to": "signaling_sbml_maeda2006_myosinphosphorylation_biomd0000000088_model.calcium_super_2_endsuper_calcium_m",
"description": "calcium Super 2 Endsuper calcium M. Maps to SBML symbol `s277` and is emitted in native SBML units."
},
{
"name": "state",
"label": "Observable state",
"maps_to": "signaling_sbml_maeda2006_myosinphosphorylation_biomd0000000088_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "signaling_sbml_maeda2006_myosinphosphorylation_biomd0000000088_model.summary"
},
{
"name": "species_labels",
"label": "Observable labels",
"maps_to": "signaling_sbml_maeda2006_myosinphosphorylation_biomd0000000088_model.species_labels"
}
]
},
"tags": [
"signaling",
"systems",
"systems-biology",
"sbml",
"faithful",
"biomodels_ebi",
"coagulation"
],
"title": "Maeda2006_MyosinPhosphorylation Lab",
"models": [
{
"path": "owned/models/signaling_sbml_maeda2006_myosinphosphorylation_biomd0000000088_model",
"alias": "signaling_sbml_maeda2006_myosinphosphorylation_biomd0000000088_model",
"provenance": {
"owned_path": "owned/models/signaling_sbml_maeda2006_myosinphosphorylation_biomd0000000088_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.signaling_sbml_maeda2006_myosinphosphorylation_biomd0000000088_model_state"
],
"from": "signaling_sbml_maeda2006_myosinphosphorylation_biomd0000000088_model.state"
},
{
"to": [
"visualisation.signaling_sbml_maeda2006_myosinphosphorylation_biomd0000000088_model_summary"
],
"from": "signaling_sbml_maeda2006_myosinphosphorylation_biomd0000000088_model.summary"
},
{
"to": [
"visualisation.signaling_sbml_maeda2006_myosinphosphorylation_biomd0000000088_model_species_labels"
],
"from": "signaling_sbml_maeda2006_myosinphosphorylation_biomd0000000088_model.species_labels"
}
],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "Clean Biosimulant lab for systems signaling model: Maeda2006_MyosinPhosphorylation. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
"schema_version": "2.0"
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