Bertram2006 - Simplified Mitochondrial ATP Production Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_adpc",
        "label": "Initial Adpc",
        "maps_to": "physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model.initial_adpc",
        "description": "Initial value for Adpc. Maps to source symbol `ADPc`. Units: uM. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "uM"
        ]
      },
      {
        "name": "initial_adpm",
        "label": "Initial Adpm",
        "maps_to": "physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model.initial_adpm",
        "description": "Initial value for Adpm. Maps to source symbol `ADPm`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "mM"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model.variable_labels"
      },
      {
        "name": "adpc",
        "label": "Adpc",
        "maps_to": "physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model.adpc",
        "description": "Adpc. Maps to source symbol `ADPc`. Units: uM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "adpm",
        "label": "Adpm",
        "maps_to": "physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model.adpm",
        "description": "Adpm. Maps to source symbol `ADPm`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "atpc",
        "label": "Atpc",
        "maps_to": "physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model.atpc",
        "description": "Atpc. Maps to source symbol `ATPc`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "atpm",
        "label": "Atpm",
        "maps_to": "physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model.atpm",
        "description": "Atpm. Maps to source symbol `ATPm`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "jh_atp",
        "label": "Jh ATP",
        "maps_to": "physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model.jh_atp",
        "description": "Jh ATP. Maps to source symbol `Jh_atp`. Units: uM_per_ms. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "cam",
        "label": "Cam",
        "maps_to": "physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model.cam",
        "description": "Cam. Maps to source symbol `Cam`. Units: uM. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Bertram2006 - Simplified Mitochondrial ATP Production Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model",
      "alias": "physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model",
      "parameters": {
        "model_path": "data/bertram_2006.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model_state"
      ],
      "from": "physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model_summary"
      ],
      "from": "physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model_trajectory"
      ],
      "from": "physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model_variable_labels"
      ],
      "from": "physiology_cellml_bertram_pedersen_luciani_and_sherman_2006_bertrampedersenlucianisherman_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Bertram, Pedersen, Luciani and Sherman 2006. Public controls and outputs are mapped to real source symbols for source-model physiology.",
  "schema_version": "2.0"
}