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Venkatraman2012 Interplay Between Pls And Tsp1 In Tgf 1 Activation Lab

About lab

Venkatraman2012 - Interplay between PLS and TSP1 in TGF-β1 activation The interplay between PLS (Plasmin) and TSP1 (Thrombospondin-1) in TGF-β1 (Transforming growth factor-β1)is shown using mathematic. It can be used to explore systemsbiology venkatraman2012 interplay between pls and dynamics and compare simulation behavior across conditions.

Runtime

Duration1
Comms Step0.1

Runs

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Completed0
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Metadata

Packagevenkatraman2012-interplay-between-pls-and-tsp1-in-tgf-1-activati
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_ltg_fb1",
        "label": "Initial Ltg FB1",
        "maps_to": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model.initial_ltg_fb1",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `species_5`."
      },
      {
        "name": "initial_tg_fb1",
        "label": "Initial Tg FB1",
        "maps_to": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model.initial_tg_fb1",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `species_6`."
      },
      {
        "name": "initial_a2_m",
        "label": "Initial A2 M",
        "maps_to": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model.initial_a2_m",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `species_10`."
      },
      {
        "name": "initial_model_state_plg",
        "label": "Initial Model State Plg",
        "maps_to": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model.initial_model_state_plg",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `species_1`."
      },
      {
        "name": "initial_sc_upa",
        "label": "Initial Sc Upa",
        "maps_to": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model.initial_sc_upa",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `species_3`."
      },
      {
        "name": "initial_tc_upa",
        "label": "Initial Tc Upa",
        "maps_to": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model.initial_tc_upa",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `species_4`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model.species_labels"
      },
      {
        "name": "ltg_fb1",
        "maps_to": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model.ltg_fb1"
      },
      {
        "name": "tg_fb1",
        "maps_to": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model.tg_fb1"
      },
      {
        "name": "a2_m",
        "maps_to": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model.a2_m"
      },
      {
        "name": "plg",
        "maps_to": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model.plg"
      },
      {
        "name": "sc_upa",
        "maps_to": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model.sc_upa"
      },
      {
        "name": "tc_upa",
        "maps_to": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model.tc_upa"
      }
    ]
  },
  "tags": [
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Venkatraman2012 Interplay Between Pls And Tsp1 In Tgf 1 Activation Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model",
      "alias": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model_state"
      ],
      "from": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model_summary"
      ],
      "from": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model_species_labels"
      ],
      "from": "systemsbiology_sbml_venkatraman2012_interplay_between_pls_and_tsp1_i_biomd0000000447_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Venkatraman2012 - Interplay between PLS and TSP1 in TGF-β1 activation The interplay between PLS (Plasmin) and TSP1 (Thrombospondin-1) in TGF-β1 (Transforming growth factor-β1)is shown using mathematic. It can be used to explore systemsbiology venkatraman2012 interplay between pls and dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

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