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Pandey2018 Reversible Transition Between Quiescence And Proliferation Lab

About lab

Cells switch between quiescence and proliferation states for maintaining tissue homeostasis and regeneration. At the restriction point (R-point), cells become irreversibly committed to the completion.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagepandey2018-reversible-transition-between-quiescence-and-prolifer
Created2026-05-17
Updated2026-05-17
generegulationsystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_cdh1dp",
        "label": "Initial Cdh1dp",
        "maps_to": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model.initial_cdh1dp",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Cdh1dp`."
      },
      {
        "name": "initial_cdh1_t",
        "label": "Initial Cdh1 T",
        "maps_to": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model.initial_cdh1_t",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Cdh1T`."
      },
      {
        "name": "initial_cdh1",
        "label": "Initial Cdh1",
        "maps_to": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model.initial_cdh1",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Cdh1`."
      },
      {
        "name": "initial_model_state_rb",
        "label": "Initial Model State Rb",
        "maps_to": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model.initial_model_state_rb",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Rb`."
      },
      {
        "name": "initial_cki_t",
        "label": "Initial Cki T",
        "maps_to": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model.initial_cki_t",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `CkiT`."
      },
      {
        "name": "initial_cyc_et",
        "label": "Initial Cyc Et",
        "maps_to": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model.initial_cyc_et",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `CycET`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model.species_labels"
      },
      {
        "name": "cdh1dp",
        "maps_to": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model.cdh1dp"
      },
      {
        "name": "cdh1_t",
        "maps_to": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model.cdh1_t"
      },
      {
        "name": "cdh1",
        "maps_to": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model.cdh1"
      },
      {
        "name": "model_state_rb",
        "maps_to": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model.model_state_rb"
      },
      {
        "name": "cki_t",
        "maps_to": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model.cki_t"
      },
      {
        "name": "cyc_et",
        "maps_to": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model.cyc_et"
      }
    ]
  },
  "tags": [
    "generegulation",
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Pandey2018 Reversible Transition Between Quiescence And Proliferation Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model",
      "alias": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model_state"
      ],
      "from": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model_summary"
      ],
      "from": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model_species_labels"
      ],
      "from": "systemsbiology_sbml_pandey2018_reversible_transition_between_quiesce_biomd0000000954_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Cells switch between quiescence and proliferation states for maintaining tissue homeostasis and regeneration. At the restriction point (R-point), cells become irreversibly committed to the completion.",
  "schema_version": "2.0"
}

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