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Bayleyegn2016 - interactions of CycE/Cdk2, Cdc25A, and P27 Kip1 in a core cancer subnetwork Lab

About lab

Mathematical description of the interactions of CycE/Cdk2, Cdc25A, and P27Kip1 in a core cancer subnetwork. Model is encoded by Matthieu Maire/partially by Krishna Kumar Tiwari and submitted to BioMod.

Runtime

Duration10
Comms Step1

Runs

Total0
Completed0
Failed0

Metadata

Packagebayleyegn2016-interactions-of-cyce-cdk2-cdc25a-and-p27-kip1-in-a
Created2026-05-16
Updated2026-05-16
biomodels_ebicellcyclecuratedfaithfuloncologyphysiologysbmlsystemsbiologytumor-growthvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_cyce_cdk2",
        "label": "CycE/CDK2",
        "units": "native SBML value",
        "default": 1,
        "maps_to": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.initial_cyce_cdk2",
        "description": "Initial CycE/CDK2. Sets the initial value of bundled SBML symbol `CycE_CDK2`."
      },
      {
        "name": "initial_cdc25a",
        "label": "Cdc25A",
        "units": "native SBML value",
        "default": 1,
        "maps_to": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.initial_cdc25a",
        "description": "Initial Cdc25A. Sets the initial value of bundled SBML symbol `Cdc25A`."
      },
      {
        "name": "initial_p27_kip1",
        "label": "p27 Kip1",
        "units": "native SBML value",
        "default": 1,
        "maps_to": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.initial_p27_kip1",
        "description": "Initial p27 Kip1. Sets the initial value of bundled SBML symbol `p27_kip1`."
      }
    ],
    "outputs": [
      {
        "name": "cyc_e_cdk2",
        "maps_to": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.cyc_e_cdk2",
        "description": "CycE CDK2 observable. Maps to SBML symbol `CycE_CDK2`."
      },
      {
        "name": "p27_kip1",
        "maps_to": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.p27_kip1",
        "description": "P27 kip1 observable. Maps to SBML symbol `p27_kip1`."
      },
      {
        "name": "cdc25a",
        "maps_to": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.cdc25a",
        "description": "Cdc25A observable. Maps to SBML symbol `Cdc25A`."
      },
      {
        "name": "state",
        "maps_to": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.state",
        "description": "Full raw SBML observable record for reproducibility and downstream visualisation."
      },
      {
        "name": "summary",
        "maps_to": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.summary",
        "description": "Change and peak summary across the simulated SBML observables."
      },
      {
        "name": "species_labels",
        "maps_to": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.species_labels",
        "description": "Mapping from selected raw SBML observable symbols to display labels."
      }
    ]
  },
  "tags": [
    "biomodels_ebi",
    "cellcycle",
    "curated",
    "faithful",
    "oncology",
    "physiology",
    "sbml",
    "systemsbiology",
    "tumor-growth"
  ],
  "title": "Bayleyegn2016 - interactions of CycE/Cdk2, Cdc25A, and P27 Kip1 in a core cancer subnetwork Lab",
  "models": [
    {
      "path": "owned/models/oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model",
      "alias": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model",
      "provenance": {
        "owned_path": "owned/models/oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model_state"
      ],
      "from": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.state"
    },
    {
      "to": [
        "visualisation.oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model_summary"
      ],
      "from": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.summary"
    },
    {
      "to": [
        "visualisation.oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model_species_labels"
      ],
      "from": "oncology_sbml_bayleyegn2016_interactions_of_cyce_cdk2_cdc25a_a_model2003180002_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "Mathematical description of the interactions of CycE/Cdk2, Cdc25A, and P27Kip1 in a core cancer subnetwork. Model is encoded by Matthieu Maire/partially by Krishna Kumar Tiwari and submitted to BioMod.",
  "schema_version": "2.0"
}

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