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Carro2011 - Cardiac Electrophysiology 367 Lab

About lab

Source-faithful physiology lab for Carro, Rodriguez, Laguna, Pueyo (2011). Public controls and outputs are mapped to real source symbols for electrophysiology.

Runtime

Duration0.01
Comms Step0.01
Settle Steps1

Runs

Total0
Completed0
Failed0

Metadata

Packagecarro2011-cardiac-electrophysiology-367-lab
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_membrane_voltage",
        "label": "Initial Membrane Voltage",
        "maps_to": "physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model.initial_membrane_voltage",
        "description": "Initial value for Membrane Voltage. Maps to source symbol `V`. Units: millivolt. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "millivolt"
        ]
      },
      {
        "name": "initial_f_ca_b_j",
        "label": "Initial F Ca B J",
        "maps_to": "physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model.initial_f_ca_b_j",
        "description": "Initial value for F Ca B J. Maps to source symbol `f_Ca_B_j`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "dimensionless"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model.variable_labels"
      },
      {
        "name": "calcium_current_i_ca_tot",
        "label": "Calcium Current I Ca Tot",
        "maps_to": "physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model.calcium_current_i_ca_tot",
        "description": "Calcium Current I Ca Tot. Maps to source symbol `I_Ca_tot`. Units: picoA_per_picoF. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "sodium_current",
        "label": "Sodium Current",
        "maps_to": "physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model.sodium_current",
        "description": "Sodium Current. Maps to source symbol `I_Na_tot`. Units: picoA_per_picoF. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "chloride_current_i_cl_tot",
        "label": "Chloride Current I Cl Tot",
        "maps_to": "physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model.chloride_current_i_cl_tot",
        "description": "Chloride Current I Cl Tot. Maps to source symbol `I_Cl_tot`. Units: picoA_per_picoF. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "sodium_current_i_ca_na",
        "label": "Sodium Current I Ca Na",
        "maps_to": "physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model.sodium_current_i_ca_na",
        "description": "Sodium Current I Ca Na. Maps to source symbol `I_Ca_Na`. Units: picoA_per_picoF. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "sodium_current_i_ca_na_junc",
        "label": "Sodium Current I Ca Na Junc",
        "maps_to": "physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model.sodium_current_i_ca_na_junc",
        "description": "Sodium Current I Ca Na Junc. Maps to source symbol `I_Ca_Na_junc`. Units: picoA_per_picoF. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "sodium_current_i_ca_na_sl",
        "label": "Sodium Current I Ca Na Sl",
        "maps_to": "physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model.sodium_current_i_ca_na_sl",
        "description": "Sodium Current I Ca Na Sl. Maps to source symbol `I_Ca_Na_sl`. Units: picoA_per_picoF. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Carro2011 - Cardiac Electrophysiology 367 Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model",
      "alias": "physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model",
      "parameters": {
        "model_path": "data/Carro_Rodriguez_Laguna_Pueyo_2011_ENDO.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model_state"
      ],
      "from": "physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model_summary"
      ],
      "from": "physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model_trajectory"
      ],
      "from": "physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model_variable_labels"
      ],
      "from": "physiology_cellml_carro_rodriguez_laguna_pueyo_2011_367_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Carro, Rodriguez, Laguna, Pueyo (2011). Public controls and outputs are mapped to real source symbols for electrophysiology.",
  "schema_version": "2.0"
}

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