About lab
Mouse Iron Distribution Dynamics Dynamic model of iron distribution in mice. This model includes only normal iron with the parameters that fit the data from Lopes et al.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagemouse-iron-distribution-rich-iron-diet-lab
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_fe_liver",
"label": "Initial Fe Liver",
"maps_to": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model.initial_fe_liver",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `FeLiver`."
},
{
"name": "initial_fe_rbc",
"label": "Initial Fe Rbc",
"maps_to": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model.initial_fe_rbc",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `FeRBC`."
},
{
"name": "initial_fe_duo",
"label": "Initial Fe Duo",
"maps_to": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model.initial_fe_duo",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `FeDuo`."
},
{
"name": "initial_fe_spleen",
"label": "Initial Fe Spleen",
"maps_to": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model.initial_fe_spleen",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `FeSpleen`."
},
{
"name": "initial_fe_bm",
"label": "Initial Fe Bm",
"maps_to": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model.initial_fe_bm",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `FeBM`."
},
{
"name": "initial_fe_rest",
"label": "Initial Fe Rest",
"maps_to": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model.initial_fe_rest",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `FeRest`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model.species_labels"
},
{
"name": "fe_liver",
"maps_to": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model.fe_liver"
},
{
"name": "fe_rbc",
"maps_to": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model.fe_rbc"
},
{
"name": "fe_duo",
"maps_to": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model.fe_duo"
},
{
"name": "fe_spleen",
"maps_to": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model.fe_spleen"
},
{
"name": "fe_bm",
"maps_to": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model.fe_bm"
},
{
"name": "fe_rest",
"maps_to": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model.fe_rest"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Mouse Iron Distribution Rich Iron Diet Lab",
"models": [
{
"path": "owned/models/systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model",
"alias": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model",
"provenance": {
"owned_path": "owned/models/systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model_state"
],
"from": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model_summary"
],
"from": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model_species_labels"
],
"from": "systemsbiology_sbml_mouse_iron_distribution_rich_iron_diet_no_tracer_biomd0000000738_model.species_labels"
}
],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "Mouse Iron Distribution Dynamics Dynamic model of iron distribution in mice. This model includes only normal iron with the parameters that fit the data from Lopes et al.",
"schema_version": "2.0"
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