Nag2011 Chloroplasticstarchdegradation Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_atp_pool",
        "label": "Initial ATP Pool",
        "maps_to": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model.initial_atp_pool",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cpd_C00002tot_CY`."
      },
      {
        "name": "initial_adp_pool",
        "label": "Initial ADP Pool",
        "maps_to": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model.initial_adp_pool",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cpd_C00008tot_CY`."
      },
      {
        "name": "initial_d_glucose_1_6_bisphosphate_pool",
        "label": "Initial D Glucose 1 6 Bisphosphate Pool",
        "maps_to": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model.initial_d_glucose_1_6_bisphosphate_pool",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cpd_C00660tot_CY`."
      },
      {
        "name": "initial_d_glucose",
        "label": "Initial D Glucose",
        "maps_to": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model.initial_d_glucose",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cpd_C00031_CY`."
      },
      {
        "name": "initial_d_glucose_2",
        "label": "Initial D Glucose 2",
        "maps_to": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model.initial_d_glucose_2",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cpd_C00031_CS`."
      },
      {
        "name": "initial_glucose_transporter_p_glc_t",
        "label": "Initial Glucose Transporter P Glc T",
        "maps_to": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model.initial_glucose_transporter_p_glc_t",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `tc_2_A_1_1_17_CIMS`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model.species_labels"
      },
      {
        "name": "atp_pool",
        "maps_to": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model.atp_pool"
      },
      {
        "name": "adp_pool",
        "maps_to": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model.adp_pool"
      },
      {
        "name": "d_glucose_1_6_bisphosphate_pool",
        "maps_to": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model.d_glucose_1_6_bisphosphate_pool"
      },
      {
        "name": "d_glucose",
        "maps_to": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model.d_glucose"
      },
      {
        "name": "d_glucose_2",
        "maps_to": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model.d_glucose_2"
      },
      {
        "name": "glucose_transporter_p_glc_t",
        "maps_to": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model.glucose_transporter_p_glc_t"
      }
    ]
  },
  "tags": [
    "cellcycle",
    "signaling",
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Nag2011 Chloroplasticstarchdegradation Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model",
      "alias": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model_state"
      ],
      "from": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model_summary"
      ],
      "from": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model_species_labels"
      ],
      "from": "systemsbiology_sbml_nag2011_chloroplasticstarchdegradation_biomd0000000353_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "This model is from the article: Kinetic modeling and exploratory numerical simulation of chloroplastic starch degradation. Nag A, Lunacek M, Graf PA, Chang CH.",
  "schema_version": "2.0"
}