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Tang2020 COVID-19 Intervention Risk Original Model Lab

About lab

Single-model lab wrapper for Tang2020 - Estimation of transmission risk of COVID-19 and impact of public health interventions. Since the emergence of the first cases in Wuhan, China, the novel coronavirus (2019-nCoV) infection has been quickly spreading out to other provinces and neighboring countries. It can be used to explore transmission dynamics and compare scenario outcomes across conditions.

Runtime

Duration10
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagetang2020-covid-19-intervention-risk-original-model-lab
Created2026-05-15
Updated2026-05-15
biomodels_ebicuratedepidemiologyfaithfulsbmltelluriumvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "transmission_probability",
        "label": "Transmission Probability",
        "maps_to": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.transmission_probability"
      },
      {
        "name": "exposed_progression_rate",
        "label": "Exposed Progression Rate",
        "maps_to": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.exposed_progression_rate"
      },
      {
        "name": "daily_contact_rate",
        "label": "Daily Contact Rate",
        "maps_to": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.daily_contact_rate"
      },
      {
        "name": "quarantine_probability",
        "label": "Quarantine Probability",
        "maps_to": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.quarantine_probability"
      },
      {
        "name": "hospitalization_rate",
        "label": "Hospitalization Rate",
        "maps_to": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.hospitalization_rate"
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Model state",
        "maps_to": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation summary",
        "maps_to": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.summary"
      },
      {
        "name": "species_labels",
        "label": "Species labels",
        "maps_to": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.species_labels"
      },
      {
        "name": "exposed_quarantined",
        "label": "Exposed quarantined",
        "maps_to": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.exposed_quarantined"
      },
      {
        "name": "susceptible_quarantined",
        "label": "Susceptible quarantined",
        "maps_to": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.susceptible_quarantined"
      },
      {
        "name": "exposed",
        "label": "Exposed",
        "maps_to": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.exposed"
      },
      {
        "name": "infected",
        "label": "Infected",
        "maps_to": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.infected"
      },
      {
        "name": "hospitalised",
        "label": "Hospitalised",
        "maps_to": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.hospitalised"
      },
      {
        "name": "susceptible",
        "label": "Susceptible",
        "maps_to": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.susceptible"
      },
      {
        "name": "recovered",
        "label": "Recovered",
        "maps_to": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.recovered"
      },
      {
        "name": "asymptomatic",
        "label": "Asymptomatic",
        "maps_to": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.asymptomatic"
      }
    ]
  },
  "title": "Tang2020 COVID-19 Intervention Risk Original Model Lab",
  "models": [
    {
      "path": "owned/models/epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model",
      "alias": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model",
      "parameters": {
        "model_path": "data/BIOMD0000000971.xml",
        "integration_step": 0.1
      },
      "provenance": {
        "owned_path": "owned/models/epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model_state"
      ],
      "from": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.state"
    },
    {
      "to": [
        "visualisation.epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model_summary"
      ],
      "from": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.summary"
    },
    {
      "to": [
        "visualisation.epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model_species_labels"
      ],
      "from": "epidemiology_sbml_tang2020_estimation_of_transmission_risk_of_covi_biomd0000000971_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Single-model lab wrapper for Tang2020 - Estimation of transmission risk of COVID-19 and impact of public health interventions. Since the emergence of the first cases in Wuhan, China, the novel coronavirus (2019-nCoV) infection has been quickly spreading out to other provinces and neighboring countries. It can be used to explore transmission dynamics and compare scenario outcomes across conditions.",
  "schema_version": "2.0"
}

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