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Biomodels model2001080002 - Topp200 B Cell Mass Insulin Glucose Kinetics Pathways Lab

About lab

Source-faithful physiology lab for Topp200 - Model of b-Cell Mass, Insulin, and Glucose Kinetics:Pathways to Diabetes. Public controls and outputs are mapped to real source symbols for glucose-insulin physiology.

Runtime

Duration0.01
Comms Step0.01
Settle Steps1

Runs

Total0
Completed0
Failed0

Metadata

Packagebiomodels-model2001080002-topp200-b-cell-mass-insulin-glucose-ki
Created2026-05-23
Updated2026-05-23
physiologysbmlbiomodels_ebifaithfulvisualisationother

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_glucose_state",
        "label": "Initial Glucose State (source G)",
        "maps_to": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.initial_glucose_state",
        "description": "Initial value for Glucose State (source G). Maps to source symbol `G`. Units: native SBML value. Naming evidence: glucose-insulin context supports a glucose-prefixed state."
      },
      {
        "name": "initial_insulin_state",
        "label": "Initial Insulin State (source I)",
        "maps_to": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.initial_insulin_state",
        "description": "Initial value for Insulin State (source I). Maps to source symbol `I`. Units: native SBML value. Naming evidence: glucose-insulin context supports an insulin-prefixed state."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.trajectory"
      },
      {
        "name": "species_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.species_labels"
      },
      {
        "name": "glucose_state",
        "label": "Glucose State (source G)",
        "maps_to": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.glucose_state",
        "description": "Glucose State (source G). Maps to source symbol `G`. Units: native SBML value. Naming evidence: glucose-insulin context supports a glucose-prefixed state."
      },
      {
        "name": "insulin_state",
        "label": "Insulin State (source I)",
        "maps_to": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.insulin_state",
        "description": "Insulin State (source I). Maps to source symbol `I`. Units: native SBML value. Naming evidence: glucose-insulin context supports an insulin-prefixed state."
      },
      {
        "name": "beta",
        "label": "Beta",
        "maps_to": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.beta",
        "description": "Beta. Maps to source symbol `beta`. Units: native SBML value. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Biomodels model2001080002 - Topp200 B Cell Mass Insulin Glucose Kinetics Pathways Lab",
  "models": [
    {
      "path": "owned/models/physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model",
      "alias": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model",
      "parameters": {
        "model_path": "data/MODEL2001080002.xml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model_state"
      ],
      "from": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.state"
    },
    {
      "to": [
        "visualisation.physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model_summary"
      ],
      "from": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model_trajectory"
      ],
      "from": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model_species_labels"
      ],
      "from": "physiology_sbml_topp200_model_of_b_cell_mass_insulin_and_glucose_model2001080002_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Topp200 - Model of b-Cell Mass, Insulin, and Glucose Kinetics:Pathways to Diabetes. Public controls and outputs are mapped to real source symbols for glucose-insulin physiology.",
  "schema_version": "2.0"
}

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