Budding yeast size control by titration of nuclear sites Lab

{
  "io": {
    "inputs": [
      {
        "name": "total_cln3",
        "maps_to": "heldt2018_budding_yeast_size_control_biomd.total_cln3"
      },
      {
        "name": "total_whi5",
        "maps_to": "heldt2018_budding_yeast_size_control_biomd.total_whi5"
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "heldt2018_budding_yeast_size_control_biomd.state"
      },
      {
        "name": "summary",
        "maps_to": "heldt2018_budding_yeast_size_control_biomd.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "heldt2018_budding_yeast_size_control_biomd.species_labels"
      },
      {
        "name": "titration_module_state",
        "maps_to": "heldt2018_budding_yeast_size_control_biomd.titration_module_state"
      },
      {
        "name": "growth_initiation_state",
        "maps_to": "heldt2018_budding_yeast_size_control_biomd.growth_initiation_state"
      },
      {
        "name": "growth_division_state",
        "maps_to": "heldt2018_budding_yeast_size_control_biomd.growth_division_state"
      },
      {
        "name": "growth_initiation_titration_complex",
        "maps_to": "heldt2018_budding_yeast_size_control_biomd.growth_initiation_titration_complex"
      }
    ]
  },
  "title": "Budding yeast size control by titration of nuclear sites Lab",
  "models": [
    {
      "path": "owned/models/heldt2018_budding_yeast_size_control_biomd",
      "alias": "heldt2018_budding_yeast_size_control_biomd",
      "provenance": {
        "owned_path": "owned/models/heldt2018_budding_yeast_size_control_biomd"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.heldt2018_budding_yeast_size_control_biomd_state"
      ],
      "from": "heldt2018_budding_yeast_size_control_biomd.state"
    },
    {
      "to": [
        "visualisation.heldt2018_budding_yeast_size_control_biomd_summary"
      ],
      "from": "heldt2018_budding_yeast_size_control_biomd.summary"
    },
    {
      "to": [
        "visualisation.heldt2018_budding_yeast_size_control_biomd_species_labels"
      ],
      "from": "heldt2018_budding_yeast_size_control_biomd.species_labels"
    },
    {
      "to": [
        "visualisation.heldt2018_budding_yeast_size_control_biomd_titration_module_state"
      ],
      "from": "heldt2018_budding_yeast_size_control_biomd.titration_module_state"
    },
    {
      "to": [
        "visualisation.heldt2018_budding_yeast_size_control_biomd_growth_initiation_state"
      ],
      "from": "heldt2018_budding_yeast_size_control_biomd.growth_initiation_state"
    },
    {
      "to": [
        "visualisation.heldt2018_budding_yeast_size_control_biomd_growth_division_state"
      ],
      "from": "heldt2018_budding_yeast_size_control_biomd.growth_division_state"
    },
    {
      "to": [
        "visualisation.heldt2018_budding_yeast_size_control_biomd_growth_initiation_titration_complex"
      ],
      "from": "heldt2018_budding_yeast_size_control_biomd.growth_initiation_titration_complex"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Curated microbiology lab for Budding yeast size control by titration of nuclear sites. The bundled SBML is executed directly through Tellurium and visualised with conservative, source-traceable labels.",
  "schema_version": "2.0"
}