About lab
The paper describes a model of oncolytic virotherapy. Created by COPASI 4.26 (Build 213) This model is described in the article: Mathematical Modelling of the Interaction Between Cancer Cells and an O.
Runtime
Duration10
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packagejenner2018-treatment-of-oncolytic-virus-lab
Created2026-05-16
Updated2026-05-16
biomodels_ebicurateddrug-responsefaithfulimmunotherapyoncologypharmacologyphysiologysbmlsystemsbiologytumor-growthvirotherapyvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_virus_load",
"label": "Virus Load",
"units": "native SBML value",
"default": 0,
"maps_to": "oncology_sbml_jenner2018_treatment_of_oncolytic_virus_biomd0000000789_model.initial_virus_load",
"description": "Initial Virus Load. Sets the initial value of bundled SBML symbol `V`."
},
{
"name": "initial_susceptible_tumor_cells",
"label": "Susceptible Tumor Cells",
"units": "native SBML value",
"default": 251000000,
"maps_to": "oncology_sbml_jenner2018_treatment_of_oncolytic_virus_biomd0000000789_model.initial_susceptible_tumor_cells",
"description": "Initial Susceptible Tumor Cells. Sets the initial value of bundled SBML symbol `S`."
},
{
"name": "initial_infected_tumor_cells",
"label": "Infected Tumor Cells",
"units": "native SBML value",
"default": 0,
"maps_to": "oncology_sbml_jenner2018_treatment_of_oncolytic_virus_biomd0000000789_model.initial_infected_tumor_cells",
"description": "Initial Infected Tumor Cells. Sets the initial value of bundled SBML symbol `I`."
}
],
"outputs": [
{
"name": "virus_load",
"maps_to": "oncology_sbml_jenner2018_treatment_of_oncolytic_virus_biomd0000000789_model.virus_load",
"description": "Virus Load observable. Maps to SBML symbol `V`."
},
{
"name": "susceptible_tumor_cells",
"maps_to": "oncology_sbml_jenner2018_treatment_of_oncolytic_virus_biomd0000000789_model.susceptible_tumor_cells",
"description": "Susceptible Tumor Cells observable. Maps to SBML symbol `S`."
},
{
"name": "infected_tumor_cells",
"maps_to": "oncology_sbml_jenner2018_treatment_of_oncolytic_virus_biomd0000000789_model.infected_tumor_cells",
"description": "Infected Tumor Cells observable. Maps to SBML symbol `I`."
},
{
"name": "state",
"maps_to": "oncology_sbml_jenner2018_treatment_of_oncolytic_virus_biomd0000000789_model.state",
"description": "Full raw SBML observable record for reproducibility and downstream visualisation."
},
{
"name": "summary",
"maps_to": "oncology_sbml_jenner2018_treatment_of_oncolytic_virus_biomd0000000789_model.summary",
"description": "Change and peak summary across the simulated SBML observables."
},
{
"name": "species_labels",
"maps_to": "oncology_sbml_jenner2018_treatment_of_oncolytic_virus_biomd0000000789_model.species_labels",
"description": "Mapping from selected raw SBML observable symbols to display labels."
}
]
},
"tags": [
"biomodels_ebi",
"curated",
"drug-response",
"faithful",
"immunotherapy",
"oncology",
"pharmacology",
"physiology",
"sbml",
"systemsbiology",
"tumor-growth",
"virotherapy"
],
"title": "Jenner2018 - treatment of oncolytic virus Lab",
"models": [
{
"path": "owned/models/oncology_sbml_jenner2018_treatment_of_oncolytic_virus_biomd0000000789_model",
"alias": "oncology_sbml_jenner2018_treatment_of_oncolytic_virus_biomd0000000789_model",
"provenance": {
"owned_path": "owned/models/oncology_sbml_jenner2018_treatment_of_oncolytic_virus_biomd0000000789_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.oncology_sbml_jenner2018_treatment_of_oncolytic_virus_biomd0000000789_model_state"
],
"from": "oncology_sbml_jenner2018_treatment_of_oncolytic_virus_biomd0000000789_model.state"
},
{
"to": [
"visualisation.oncology_sbml_jenner2018_treatment_of_oncolytic_virus_biomd0000000789_model_summary"
],
"from": "oncology_sbml_jenner2018_treatment_of_oncolytic_virus_biomd0000000789_model.summary"
},
{
"to": [
"visualisation.oncology_sbml_jenner2018_treatment_of_oncolytic_virus_biomd0000000789_model_species_labels"
],
"from": "oncology_sbml_jenner2018_treatment_of_oncolytic_virus_biomd0000000789_model.species_labels"
}
],
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"description": "The paper describes a model of oncolytic virotherapy. Created by COPASI 4.26 (Build 213) This model is described in the article: Mathematical Modelling of the Interaction Between Cancer Cells and an O.",
"schema_version": "2.0"
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