About lab
Bianconi2012 - EGFR and IGF1R pathway in lung cancer EGFR and IGF1R pathways play a key role in various human cancers and are crucial for tumour transformation and survival of malignant cells. It can be used to explore tumor-related dynamics and compare treatment-response behavior across conditions.
Runtime
Duration10
Comms Step1
Runs
Total0
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Metadata
Packagebianconi2012-egfr-and-igf1r-pathway-in-lung-cancer-lab
Created2026-05-16
Updated2026-05-16
biomodels_ebicurateddrug-responsefaithfulimmunologyimmunotherapymicroenvironmentoncologypharmacologyphysiologysbmlsignal-transductionsignalingsystemsbiologytumor-growthvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "gamma_egfr_source_parameter",
"label": "Gamma EGFR source parameter",
"units": "native SBML value",
"default": 0.02,
"maps_to": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model.gamma_egfr_source_parameter",
"description": "Gamma EGFR source parameter. Maps to bundled SBML parameter `gamma_EGFR`."
},
{
"name": "initial_egfr_active",
"label": "EGFR active",
"units": "native SBML value",
"default": 8000,
"maps_to": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model.initial_egfr_active",
"description": "Initial EGFR active. Sets the initial value of bundled SBML symbol `EGFR_active`."
},
{
"name": "initial_raf",
"label": "Raf",
"units": "native SBML value",
"default": 120000,
"maps_to": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model.initial_raf",
"description": "Initial Raf. Sets the initial value of bundled SBML symbol `Raf`."
},
{
"name": "initial_erk",
"label": "ERK",
"units": "native SBML value",
"default": 600000,
"maps_to": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model.initial_erk",
"description": "Initial ERK. Sets the initial value of bundled SBML symbol `ERK`."
},
{
"name": "initial_akt",
"label": "AKT",
"units": "native SBML value",
"default": 600000,
"maps_to": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model.initial_akt",
"description": "Initial AKT. Sets the initial value of bundled SBML symbol `AKT`."
},
{
"name": "initial_ras",
"label": "Ras",
"units": "native SBML value",
"default": 120000,
"maps_to": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model.initial_ras",
"description": "Initial Ras. Sets the initial value of bundled SBML symbol `Ras`."
}
],
"outputs": [
{
"name": "egfr_active",
"maps_to": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model.egfr_active",
"description": "EGFR active observable. Maps to SBML symbol `EGFR_active`."
},
{
"name": "raf",
"maps_to": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model.raf",
"description": "Raf observable. Maps to SBML symbol `Raf`."
},
{
"name": "erk",
"maps_to": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model.erk",
"description": "ERK observable. Maps to SBML symbol `ERK`."
},
{
"name": "akt",
"maps_to": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model.akt",
"description": "AKT observable. Maps to SBML symbol `AKT`."
},
{
"name": "ras",
"maps_to": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model.ras",
"description": "Ras observable. Maps to SBML symbol `Ras`."
},
{
"name": "pi3_kca",
"maps_to": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model.pi3_kca",
"description": "PI3KCA observable. Maps to SBML symbol `PI3KCA`."
},
{
"name": "state",
"maps_to": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model.state",
"description": "Full raw SBML observable record for reproducibility and downstream visualisation."
},
{
"name": "summary",
"maps_to": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model.summary",
"description": "Change and peak summary across the simulated SBML observables."
},
{
"name": "species_labels",
"maps_to": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model.species_labels",
"description": "Mapping from selected raw SBML observable symbols to display labels."
}
]
},
"tags": [
"biomodels_ebi",
"curated",
"drug-response",
"faithful",
"immunology",
"immunotherapy",
"microenvironment",
"oncology",
"pharmacology",
"physiology",
"sbml",
"signal-transduction",
"signaling",
"systemsbiology",
"tumor-growth"
],
"title": "Bianconi2012 - EGFR and IGF1R pathway in lung cancer Lab",
"models": [
{
"path": "owned/models/oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model",
"alias": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model",
"provenance": {
"owned_path": "owned/models/oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model_state"
],
"from": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model.state"
},
{
"to": [
"visualisation.oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model_summary"
],
"from": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model.summary"
},
{
"to": [
"visualisation.oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model_species_labels"
],
"from": "oncology_sbml_bianconi2012_egfr_and_igf1r_pathway_in_lung_canc_biomd0000000427_model.species_labels"
}
],
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"description": "Bianconi2012 - EGFR and IGF1R pathway in lung cancer EGFR and IGF1R pathways play a key role in various human cancers and are crucial for tumour transformation and survival of malignant cells. It can be used to explore tumor-related dynamics and compare treatment-response behavior across conditions.",
"schema_version": "2.0"
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