About lab
This model is taken from the <a href = 'http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=retrieve&db=pubmed&list_uids=7559438&dopt=Abstract'>Peer-reviewed publication>Husam M. It can be used to explore systemsbiology abu soud1999 nmarginine model9088169066 dynamics and compare simulation behavior across conditions.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packageabu-soud1999-nmarginine
Created2026-05-17
Updated2026-06-13
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother
Manifest
{
"io": {
"inputs": [
{
"name": "initial_nm_minus_arginine",
"label": "Initial Nm Minus Arginine",
"maps_to": "systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model.initial_nm_minus_arginine",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `NM_minus_Arginine`."
},
{
"name": "initial_im_minus_nnos",
"label": "Initial Im Minus Nnos",
"maps_to": "systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model.initial_im_minus_nnos",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Im_minus_nNOS`."
},
{
"name": "initial_imidazole",
"label": "Initial Imidazole",
"maps_to": "systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model.initial_imidazole",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Imidazole`."
},
{
"name": "initial_nnos_minus_nm_minus_arginine",
"label": "Initial Nnos Minus Nm Minus Arginine",
"maps_to": "systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model.initial_nnos_minus_nm_minus_arginine",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `nNOS_minus_NM_minus_Arginine`."
},
{
"name": "initial_im_minus_nnos_minus_nm_minus_arginine",
"label": "Initial Im Minus Nnos Minus Nm Minus Arginine",
"maps_to": "systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model.initial_im_minus_nnos_minus_nm_minus_arginine",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Im_minus_nNOS_minus_NM_minus_Arginine`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model.species_labels"
},
{
"name": "nm_minus_arginine",
"maps_to": "systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model.nm_minus_arginine"
},
{
"name": "im_minus_nnos",
"maps_to": "systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model.im_minus_nnos"
},
{
"name": "imidazole",
"maps_to": "systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model.imidazole"
},
{
"name": "nnos_minus_nm_minus_arginine",
"maps_to": "systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model.nnos_minus_nm_minus_arginine"
},
{
"name": "im_minus_nnos_minus_nm_minus_arginine",
"maps_to": "systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model.im_minus_nnos_minus_nm_minus_arginine"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Abu Soud1999 Nmarginine Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model_state"
],
"from": "systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model_summary"
],
"from": "systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model_species_labels"
],
"from": "systemsbiology_sbml_abu_soud1999_nmarginine_model9088169066_model.species_labels"
}
],
"package": "abu-soud1999-nmarginine",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "This model is taken from the <a href = 'http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=retrieve&db=pubmed&list_uids=7559438&dopt=Abstract'>Peer-reviewed publication>Husam M. It can be used to explore systemsbiology abu soud1999 nmarginine model9088169066 dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
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