Warren2009 - Mathematical Modelling Calcium Wave Propagation Mammalian Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_volume_i_ip3",
        "label": "Initial Volume I IP3",
        "maps_to": "physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model.initial_volume_i_ip3",
        "description": "Initial value for Volume I IP3. Maps to source symbol `volume_iIP3`. Units: microMVolume. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "microMVolume"
        ]
      },
      {
        "name": "initial_atp_e",
        "label": "Initial ATP E",
        "maps_to": "physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model.initial_atp_e",
        "description": "Initial value for ATP E. Maps to source symbol `ATP_e`. Units: microM. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "microM"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model.variable_labels"
      },
      {
        "name": "volume_i_ip3",
        "label": "Volume I IP3",
        "maps_to": "physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model.volume_i_ip3",
        "description": "Volume I IP3. Maps to source symbol `volume_iIP3`. Units: microMVolume. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "atp_e",
        "label": "ATP E",
        "maps_to": "physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model.atp_e",
        "description": "ATP E. Maps to source symbol `ATP_e`. Units: microM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "inositol_trisphosphate",
        "label": "Inositol Trisphosphate",
        "maps_to": "physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model.inositol_trisphosphate",
        "description": "Inositol Trisphosphate. Maps to source symbol `IP3`. Units: microM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "k_atp",
        "label": "K ATP",
        "maps_to": "physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model.k_atp",
        "description": "K ATP. Maps to source symbol `K_ATP`. Units: microM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "v_atp",
        "label": "V ATP",
        "maps_to": "physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model.v_atp",
        "description": "V ATP. Maps to source symbol `V_ATP`. Units: microMpersec. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "v_ip3",
        "label": "V IP3",
        "maps_to": "physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model.v_ip3",
        "description": "V IP3. Maps to source symbol `V_IP3`. Units: microMpersec. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Warren2009 - Mathematical Modelling Calcium Wave Propagation Mammalian Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model",
      "alias": "physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model",
      "parameters": {
        "model_path": "data/warren_2010.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model_state"
      ],
      "from": "physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model_summary"
      ],
      "from": "physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model_trajectory"
      ],
      "from": "physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model_variable_labels"
      ],
      "from": "physiology_cellml_warren_tawhai_crampin_2009_warrentawhaicrampin2009_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Warren, Tawhai, Crampin, 2009. Public controls and outputs are mapped to real source symbols for calcium handling.",
  "schema_version": "2.0"
}