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Masison2022 Cellular Ferritin Iron Storage Lab

About lab

This is a small model of ferritin iron sequestration kinetics. The model’s parameter values were determined from published kinetic and binding experiments and the model was validated against independe.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagemasison2022-cellular-ferritin-iron-storage-lab
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_core",
        "label": "Initial Core",
        "maps_to": "systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model.initial_core",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `core`."
      },
      {
        "name": "initial_ft_cage",
        "label": "Initial Ft Cage",
        "maps_to": "systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model.initial_ft_cage",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `FT_cage`."
      },
      {
        "name": "initial_model_state_lip",
        "label": "Initial Model State Lip",
        "maps_to": "systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model.initial_model_state_lip",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `LIP`."
      },
      {
        "name": "initial_model_state_dfp",
        "label": "Initial Model State Dfp",
        "maps_to": "systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model.initial_model_state_dfp",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `DFP`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model.species_labels"
      },
      {
        "name": "core",
        "maps_to": "systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model.core"
      },
      {
        "name": "ft_cage",
        "maps_to": "systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model.ft_cage"
      },
      {
        "name": "lip",
        "maps_to": "systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model.lip"
      },
      {
        "name": "dfp",
        "maps_to": "systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model.dfp"
      }
    ]
  },
  "tags": [
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Masison2022 Cellular Ferritin Iron Storage Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model",
      "alias": "systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model_state"
      ],
      "from": "systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model_summary"
      ],
      "from": "systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model_species_labels"
      ],
      "from": "systemsbiology_sbml_masison2022_cellular_ferritin_iron_storage_model2211030001_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "This is a small model of ferritin iron sequestration kinetics. The model’s parameter values were determined from published kinetic and binding experiments and the model was validated against independe.",
  "schema_version": "2.0"
}

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