Teusink2000 - Teusink Passarge Reijenga Esgalhado Vanderweijde Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_glucose_6_phosphate",
        "label": "Initial Glucose 6 Phosphate",
        "maps_to": "physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model.initial_glucose_6_phosphate",
        "description": "Initial value for Glucose 6 Phosphate. Maps to source symbol `G6P`. Units: millimolar. Naming evidence: source metadata names `G6P` as `glucose 6-phosphate`.",
        "accepted_units": [
          "millimolar"
        ]
      },
      {
        "name": "initial_acetaldehyde",
        "label": "Initial Acetaldehyde",
        "maps_to": "physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model.initial_acetaldehyde",
        "description": "Initial value for Acetaldehyde. Maps to source symbol `ACE`. Units: millimolar. Naming evidence: source metadata names `ACE` as `acetaldehyde`.",
        "accepted_units": [
          "millimolar"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model.variable_labels"
      },
      {
        "name": "adenosine_triphosphate",
        "label": "Adenosine Triphosphate",
        "maps_to": "physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model.adenosine_triphosphate",
        "description": "Adenosine Triphosphate. Maps to source symbol `ATP`. Units: millimolar. Naming evidence: source metadata names `ATP` as `adenosine triphosphate`."
      },
      {
        "name": "catp",
        "label": "Catp",
        "maps_to": "physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model.catp",
        "description": "Catp. Maps to source symbol `CATP`. Units: millimolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "ci_atp",
        "label": "Ci ATP",
        "maps_to": "physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model.ci_atp",
        "description": "Ci ATP. Maps to source symbol `Ci_ATP`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "ki_atp",
        "label": "Ki ATP",
        "maps_to": "physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model.ki_atp",
        "description": "Ki ATP. Maps to source symbol `Ki_ATP`. Units: millimolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "km_atp",
        "label": "Km ATP",
        "maps_to": "physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model.km_atp",
        "description": "Km ATP. Maps to source symbol `Km_ATP`. Units: millimolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "km_atpase",
        "label": "Km Atpase",
        "maps_to": "physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model.km_atpase",
        "description": "Km Atpase. Maps to source symbol `Km_ATPase`. Units: first_order_rate_constant. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Teusink2000 - Teusink Passarge Reijenga Esgalhado Vanderweijde Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model",
      "alias": "physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model",
      "parameters": {
        "model_path": "data/teusink_annotated_2000.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model_state"
      ],
      "from": "physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model_summary"
      ],
      "from": "physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model_trajectory"
      ],
      "from": "physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model_variable_labels"
      ],
      "from": "physiology_cellml_teusink_passarge_reijenga_esgalhado_vanderweijde_teusinkpassargereijengaesgalhadovanderweijdenschepperwalshbakkervandamwesterhoffsnoep2000_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Teusink, Passarge, Reijenga, Esgalhado, Vanderweijden, Schepper, Walsh, Bakker, Vandam, Westerhoff, Snoep, 2000. Public controls and outputs are mapped to real source symbols for glucose-insulin physiology.",
  "schema_version": "2.0"
}