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Tyson1991 - Cell Cycle 6 var Lab

About lab

Single-model lab wrapper for Tyson1991 - Cell Cycle 6 var. Tyson1991 - Cell Cycle 6 var Mathematical model of the interactions of cdc2 and cyclin. This model is described in the article: Modeling the cell division cycle: cdc2 and cyclin interactions.

Runtime

Duration10
Comms Step1

Runs

Total0
Completed0
Failed0

Metadata

Packagetyson1991-cell-cycle-6-var-lab
Created2026-05-15
Updated2026-05-15
cellcyclesbmlbiomodels_ebifaithfulvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "total_cyclin",
        "label": "Total Cyclin",
        "maps_to": "cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.total_cyclin",
        "description": "Controls Total Cyclin in the lab model via `cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.total_cyclin`."
      },
      {
        "name": "total_cdc2",
        "label": "Total Cdc2",
        "maps_to": "cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.total_cdc2",
        "description": "Controls Total Cdc2 in the lab model via `cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.total_cdc2`."
      }
    ],
    "outputs": [
      {
        "name": "cdc2k",
        "label": "Cdc2k",
        "maps_to": "cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.cdc2k",
        "description": "Tracks Cdc2k in the lab model via `cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.cdc2k`."
      },
      {
        "name": "cdc2k_p",
        "label": "Cdc2k P",
        "maps_to": "cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.cdc2k_p",
        "description": "Tracks Cdc2k P in the lab model via `cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.cdc2k_p`."
      },
      {
        "name": "phosphorylated_cyclin_cdc2",
        "label": "Phosphorylated Cyclin Cdc2",
        "maps_to": "cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.phosphorylated_cyclin_cdc2",
        "description": "Tracks Phosphorylated Cyclin Cdc2 in the lab model via `cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.phosphorylated_cyclin_cdc2`."
      },
      {
        "name": "phosphorylated_cyclin_cdc2_p",
        "label": "Phosphorylated Cyclin Cdc2 P",
        "maps_to": "cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.phosphorylated_cyclin_cdc2_p",
        "description": "Tracks Phosphorylated Cyclin Cdc2 P in the lab model via `cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.phosphorylated_cyclin_cdc2_p`."
      },
      {
        "name": "cyclin",
        "label": "Cyclin",
        "maps_to": "cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.cyclin",
        "description": "Tracks Cyclin in the lab model via `cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.cyclin`."
      },
      {
        "name": "phosphorylated_cyclin",
        "label": "Phosphorylated Cyclin",
        "maps_to": "cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.phosphorylated_cyclin",
        "description": "Tracks Phosphorylated Cyclin in the lab model via `cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.phosphorylated_cyclin`."
      }
    ]
  },
  "title": "Tyson1991 - Cell Cycle 6 var Lab",
  "models": [
    {
      "path": "owned/models/cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model",
      "alias": "cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model",
      "provenance": {
        "owned_path": "owned/models/cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model_state"
      ],
      "from": "cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.state"
    },
    {
      "to": [
        "visualisation.cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model_summary"
      ],
      "from": "cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.summary"
    },
    {
      "to": [
        "visualisation.cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model_species_labels"
      ],
      "from": "cellcycle_sbml_tyson1991_cell_cycle_6_var_biomd0000000005_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "Single-model lab wrapper for Tyson1991 - Cell Cycle 6 var. Tyson1991 - Cell Cycle 6 var Mathematical model of the interactions of cdc2 and cyclin. This model is described in the article: Modeling the cell division cycle: cdc2 and cyclin interactions.",
  "schema_version": "2.0"
}

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