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Zatorsky2006 P53 2 Lab

About lab

The model reproduces time profile of p53 and Mdm2 as depicted in Fig 6B of the paper for Model 2. It can be used to explore systemsbiology zatorsky2006 p53 model2 BioModels0000000158 dynamics and compare simulation behavior across conditions.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagezatorsky2006-p53-2-lab
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_precursor_mdm2",
        "label": "Initial Precursor Mdm2",
        "maps_to": "systemsbiology_sbml_zatorsky2006_p53_model2_biomd0000000158_model.initial_precursor_mdm2",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `y0`."
      },
      {
        "name": "initial_mdm2",
        "label": "Initial Mdm2",
        "maps_to": "systemsbiology_sbml_zatorsky2006_p53_model2_biomd0000000158_model.initial_mdm2",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `y`."
      },
      {
        "name": "initial_model_state_p53",
        "label": "Initial Model State P53",
        "maps_to": "systemsbiology_sbml_zatorsky2006_p53_model2_biomd0000000158_model.initial_model_state_p53",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `x`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_zatorsky2006_p53_model2_biomd0000000158_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_zatorsky2006_p53_model2_biomd0000000158_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_zatorsky2006_p53_model2_biomd0000000158_model.species_labels"
      },
      {
        "name": "precursor_mdm2",
        "maps_to": "systemsbiology_sbml_zatorsky2006_p53_model2_biomd0000000158_model.precursor_mdm2"
      },
      {
        "name": "mdm2",
        "maps_to": "systemsbiology_sbml_zatorsky2006_p53_model2_biomd0000000158_model.mdm2"
      },
      {
        "name": "p53",
        "maps_to": "systemsbiology_sbml_zatorsky2006_p53_model2_biomd0000000158_model.p53"
      }
    ]
  },
  "tags": [
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Zatorsky2006 P53 2 Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_zatorsky2006_p53_model2_biomd0000000158_model",
      "alias": "systemsbiology_sbml_zatorsky2006_p53_model2_biomd0000000158_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_zatorsky2006_p53_model2_biomd0000000158_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_zatorsky2006_p53_model2_biomd0000000158_model_state"
      ],
      "from": "systemsbiology_sbml_zatorsky2006_p53_model2_biomd0000000158_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_zatorsky2006_p53_model2_biomd0000000158_model_summary"
      ],
      "from": "systemsbiology_sbml_zatorsky2006_p53_model2_biomd0000000158_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_zatorsky2006_p53_model2_biomd0000000158_model_species_labels"
      ],
      "from": "systemsbiology_sbml_zatorsky2006_p53_model2_biomd0000000158_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "The model reproduces time profile of p53 and Mdm2 as depicted in Fig 6B of the paper for Model 2. It can be used to explore systemsbiology zatorsky2006 p53 model2 BioModels0000000158 dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

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