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Rattanakul2003 - Boneformation Pthadministration Lab

About lab

Source-faithful physiology lab for Rattanakul2003_BoneFormation_PTHadministration. Public controls and outputs are mapped to real source symbols for bone and endocrine physiology.

Runtime

Duration0.01
Comms Step0.01
Settle Steps1

Runs

Total0
Completed0
Failed0

Metadata

Packagerattanakul2003-boneformation-pthadministration-lab
Created2026-05-23
Updated2026-05-23
physiologysbmlbiomodels_ebifaithfulvisualisationother

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_pth",
        "label": "Initial Pth",
        "maps_to": "physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model.initial_pth",
        "description": "Initial value for Pth. Maps to source symbol `x`. Units: native SBML value. Naming evidence: source metadata names `x` as `PTH`."
      },
      {
        "name": "initial_active_osteoblasts",
        "label": "Initial Active Osteoblasts",
        "maps_to": "physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model.initial_active_osteoblasts",
        "description": "Initial value for Active Osteoblasts. Maps to source symbol `z`. Units: native SBML value. Naming evidence: source metadata names `z` as `active osteoblasts`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model.trajectory"
      },
      {
        "name": "species_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model.species_labels"
      },
      {
        "name": "pth",
        "label": "Pth",
        "maps_to": "physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model.pth",
        "description": "Pth. Maps to source symbol `x`. Units: native SBML value. Naming evidence: source metadata names `x` as `PTH`."
      },
      {
        "name": "active_osteoblasts",
        "label": "Active Osteoblasts",
        "maps_to": "physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model.active_osteoblasts",
        "description": "Active Osteoblasts. Maps to source symbol `z`. Units: native SBML value. Naming evidence: source metadata names `z` as `active osteoblasts`."
      },
      {
        "name": "active_osteoclasts",
        "label": "Active Osteoclasts",
        "maps_to": "physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model.active_osteoclasts",
        "description": "Active Osteoclasts. Maps to source symbol `y`. Units: native SBML value. Naming evidence: source metadata names `y` as `active osteoclasts`."
      }
    ]
  },
  "title": "Rattanakul2003 - Boneformation Pthadministration Lab",
  "models": [
    {
      "path": "owned/models/physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model",
      "alias": "physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model",
      "parameters": {
        "model_path": "data/MODEL1012140000.xml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model_state"
      ],
      "from": "physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model.state"
    },
    {
      "to": [
        "visualisation.physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model_summary"
      ],
      "from": "physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model_trajectory"
      ],
      "from": "physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model_species_labels"
      ],
      "from": "physiology_sbml_rattanakul2003_boneformation_pthadministration_model1012140000_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Rattanakul2003_BoneFormation_PTHadministration. Public controls and outputs are mapped to real source symbols for bone and endocrine physiology.",
  "schema_version": "2.0"
}

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