About lab
This model is from the article: Mathematical modeling and analysis of insulin clearance in vivo. It can be used to explore dose-response dynamics and compare treatment scenarios across conditions.
Runtime
Duration24
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packagekoschorreck2008-insulinclearance-lab
Created2026-05-16
Updated2026-05-16
pharmacologypharmacokineticsendocrinephysiologysbmltelluriumfaithfulbiomodels_ebivisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "liver_insulin_clearance_density",
"label": "Liver Insulin Clearance Density",
"maps_to": "pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model.liver_insulin_clearance_density"
},
{
"name": "initial_free_receptor",
"label": "Initial Free Receptor",
"maps_to": "pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model.initial_free_receptor"
},
{
"name": "initial_insulin_receptor_complex",
"label": "Initial Insulin Receptor Complex",
"maps_to": "pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model.initial_insulin_receptor_complex"
},
{
"name": "initial_internalized_receptor",
"label": "Initial Internalized Receptor",
"maps_to": "pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model.initial_internalized_receptor"
}
],
"outputs": [
{
"name": "state",
"label": "Tracked source state",
"maps_to": "pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model.summary"
},
{
"name": "species_labels",
"label": "Observable labels",
"maps_to": "pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model.species_labels"
},
{
"name": "free_receptor",
"label": "Free Receptor",
"maps_to": "pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model.free_receptor"
},
{
"name": "insulin_receptor_complex",
"label": "Insulin Receptor Complex",
"maps_to": "pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model.insulin_receptor_complex"
},
{
"name": "two_insulin_receptor_complex",
"label": "Two Insulin Receptor Complex",
"maps_to": "pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model.two_insulin_receptor_complex"
},
{
"name": "phosphorylated_receptor",
"label": "Phosphorylated Receptor",
"maps_to": "pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model.phosphorylated_receptor"
},
{
"name": "phosphorylated_insulin_receptor_complex",
"label": "Phosphorylated Insulin Receptor Complex",
"maps_to": "pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model.phosphorylated_insulin_receptor_complex"
},
{
"name": "endosomal_receptor",
"label": "Endosomal Receptor",
"maps_to": "pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model.endosomal_receptor"
},
{
"name": "endosomal_insulin_receptor_complex",
"label": "Endosomal Insulin Receptor Complex",
"maps_to": "pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model.endosomal_insulin_receptor_complex"
}
]
},
"tags": [
"pharmacology",
"pharmacokinetics",
"endocrine",
"physiology",
"sbml",
"tellurium",
"faithful",
"biomodels_ebi"
],
"title": "Koschorreck2008_InsulinClearance Lab",
"models": [
{
"path": "owned/models/pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model",
"alias": "pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model",
"parameters": {
"model_path": "data/BIOMD0000000345.xml",
"integration_step": 0.1
},
"provenance": {
"owned_path": "owned/models/pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model_state"
],
"from": "pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model.state"
},
{
"to": [
"visualisation.pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model_summary"
],
"from": "pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model.summary"
},
{
"to": [
"visualisation.pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model_species_labels"
],
"from": "pharmacology_sbml_koschorreck2008_insulinclearance_biomd0000000345_model.species_labels"
}
],
"runtime": {
"duration": 24,
"initial_inputs": {},
"communication_step": 1
},
"description": "This model is from the article: Mathematical modeling and analysis of insulin clearance in vivo. It can be used to explore dose-response dynamics and compare treatment scenarios across conditions.",
"schema_version": "2.0"
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