Al-Tuwairqi2020 - Dynamics of cancer radiovirotherapy - Phase II treatment Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_damaged_cancer_cells",
        "label": "Damaged cancer cells",
        "units": "native SBML value",
        "default": 0,
        "maps_to": "oncology_sbml_al_tuwairqi2020_dynamics_of_cancer_radiovirother_biomd0000001032_model.initial_damaged_cancer_cells",
        "description": "Initial Damaged cancer cells. Sets the initial value of bundled SBML symbol `damaged_cancer_cells`."
      },
      {
        "name": "initial_uninfected_cancer_cells",
        "label": "Uninfected cancer cells",
        "units": "native SBML value",
        "default": 0.4,
        "maps_to": "oncology_sbml_al_tuwairqi2020_dynamics_of_cancer_radiovirother_biomd0000001032_model.initial_uninfected_cancer_cells",
        "description": "Initial Uninfected cancer cells. Sets the initial value of bundled SBML symbol `uninfected_cancer_cells`."
      },
      {
        "name": "initial_free_virus",
        "label": "Free virus",
        "units": "native SBML value",
        "default": 0.1,
        "maps_to": "oncology_sbml_al_tuwairqi2020_dynamics_of_cancer_radiovirother_biomd0000001032_model.initial_free_virus",
        "description": "Initial Free virus. Sets the initial value of bundled SBML symbol `free_virus`."
      },
      {
        "name": "initial_infected_cancer_cells",
        "label": "Infected cancer cells",
        "units": "native SBML value",
        "default": 0,
        "maps_to": "oncology_sbml_al_tuwairqi2020_dynamics_of_cancer_radiovirother_biomd0000001032_model.initial_infected_cancer_cells",
        "description": "Initial Infected cancer cells. Sets the initial value of bundled SBML symbol `infected_cancer_cells`."
      }
    ],
    "outputs": [
      {
        "name": "damaged_cancer_cells",
        "maps_to": "oncology_sbml_al_tuwairqi2020_dynamics_of_cancer_radiovirother_biomd0000001032_model.damaged_cancer_cells",
        "description": "Damaged cancer cells observable. Maps to SBML symbol `damaged_cancer_cells`."
      },
      {
        "name": "uninfected_cancer_cells",
        "maps_to": "oncology_sbml_al_tuwairqi2020_dynamics_of_cancer_radiovirother_biomd0000001032_model.uninfected_cancer_cells",
        "description": "Uninfected cancer cells observable. Maps to SBML symbol `uninfected_cancer_cells`."
      },
      {
        "name": "free_virus",
        "maps_to": "oncology_sbml_al_tuwairqi2020_dynamics_of_cancer_radiovirother_biomd0000001032_model.free_virus",
        "description": "Free virus observable. Maps to SBML symbol `free_virus`."
      },
      {
        "name": "infected_cancer_cells",
        "maps_to": "oncology_sbml_al_tuwairqi2020_dynamics_of_cancer_radiovirother_biomd0000001032_model.infected_cancer_cells",
        "description": "Infected cancer cells observable. Maps to SBML symbol `infected_cancer_cells`."
      },
      {
        "name": "state",
        "maps_to": "oncology_sbml_al_tuwairqi2020_dynamics_of_cancer_radiovirother_biomd0000001032_model.state",
        "description": "Full raw SBML observable record for reproducibility and downstream visualisation."
      },
      {
        "name": "summary",
        "maps_to": "oncology_sbml_al_tuwairqi2020_dynamics_of_cancer_radiovirother_biomd0000001032_model.summary",
        "description": "Change and peak summary across the simulated SBML observables."
      },
      {
        "name": "species_labels",
        "maps_to": "oncology_sbml_al_tuwairqi2020_dynamics_of_cancer_radiovirother_biomd0000001032_model.species_labels",
        "description": "Mapping from selected raw SBML observable symbols to display labels."
      }
    ]
  },
  "tags": [
    "biomodels_ebi",
    "curated",
    "drug-response",
    "faithful",
    "immunotherapy",
    "oncology",
    "pharmacology",
    "physiology",
    "radiotherapy",
    "sbml",
    "systemsbiology",
    "tumor-growth",
    "virotherapy"
  ],
  "title": "Al-Tuwairqi2020 - Dynamics of cancer radiovirotherapy - Phase II treatment Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "oncology_sbml_al_tuwairqi2020_dynamics_of_cancer_radiovirother_biomd0000001032_model"
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.oncology_sbml_al_tuwairqi2020_dynamics_of_cancer_radiovirother_biomd0000001032_model_state"
      ],
      "from": "oncology_sbml_al_tuwairqi2020_dynamics_of_cancer_radiovirother_biomd0000001032_model.state"
    },
    {
      "to": [
        "visualisation.oncology_sbml_al_tuwairqi2020_dynamics_of_cancer_radiovirother_biomd0000001032_model_summary"
      ],
      "from": "oncology_sbml_al_tuwairqi2020_dynamics_of_cancer_radiovirother_biomd0000001032_model.summary"
    },
    {
      "to": [
        "visualisation.oncology_sbml_al_tuwairqi2020_dynamics_of_cancer_radiovirother_biomd0000001032_model_species_labels"
      ],
      "from": "oncology_sbml_al_tuwairqi2020_dynamics_of_cancer_radiovirother_biomd0000001032_model.species_labels"
    }
  ],
  "package": "al-tuwairqi2020-dynamics-of-cancer-radiovirotherapy-pha-050a2343",
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "version": "1.0.0",
  "description": "This ordinary differential equation model of cancer radiovirotherapy dynamics is described in the publication:Salma M. It can be used to explore tumor-related dynamics and compare treatment-response behavior across conditions.",
  "schema_version": "2.0"
}