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Panerai1980 - Cardiac Muscle Mechanics Energetics Lab

About lab

Source-faithful physiology lab for Panerai, 1980. Public controls and outputs are mapped to real source symbols for electrophysiology.

Runtime

Duration0.01
Comms Step0.01
Settle Steps1

Runs

Total0
Completed0
Failed0

Metadata

Packagepanerai1980-cardiac-muscle-mechanics-energetics-lab
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_crossbridges_attached_n",
        "label": "Initial Crossbridges Attached N",
        "maps_to": "physiology_cellml_panerai_1980_panerai1980_model.initial_crossbridges_attached_n",
        "description": "Initial value for Crossbridges Attached N. Maps to source symbol `n`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "dimensionless"
        ]
      },
      {
        "name": "initial_model_state_a_c",
        "label": "Initial Model State A C (source A_c)",
        "maps_to": "physiology_cellml_panerai_1980_panerai1980_model.initial_model_state_a_c",
        "description": "Initial value for Model State A C (source A_c). Maps to source symbol `A_c`. Units: dimensionless. Naming evidence: source symbol is dimensionless but lacks enough evidence for a biological label.",
        "accepted_units": [
          "dimensionless"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_panerai_1980_panerai1980_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_panerai_1980_panerai1980_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_panerai_1980_panerai1980_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_panerai_1980_panerai1980_model.variable_labels"
      },
      {
        "name": "crossbridges_attached_n",
        "label": "Crossbridges Attached N",
        "maps_to": "physiology_cellml_panerai_1980_panerai1980_model.crossbridges_attached_n",
        "description": "Crossbridges Attached N. Maps to source symbol `n`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "model_state_a_c",
        "label": "Model State A C (source A_c)",
        "maps_to": "physiology_cellml_panerai_1980_panerai1980_model.model_state_a_c",
        "description": "Model State A C (source A_c). Maps to source symbol `A_c`. Units: dimensionless. Naming evidence: source symbol is dimensionless but lacks enough evidence for a biological label."
      },
      {
        "name": "actin_free_q",
        "label": "Actin Free Q",
        "maps_to": "physiology_cellml_panerai_1980_panerai1980_model.actin_free_q",
        "description": "Actin Free Q. Maps to source symbol `q`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "alpha_p",
        "label": "Alpha P",
        "maps_to": "physiology_cellml_panerai_1980_panerai1980_model.alpha_p",
        "description": "Alpha P. Maps to source symbol `alpha_p`. Units: force. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "alpha_s",
        "label": "Alpha S",
        "maps_to": "physiology_cellml_panerai_1980_panerai1980_model.alpha_s",
        "description": "Alpha S. Maps to source symbol `alpha_s`. Units: force. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "at_0",
        "label": "At 0",
        "maps_to": "physiology_cellml_panerai_1980_panerai1980_model.at_0",
        "description": "At 0. Maps to source symbol `AT_0`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Panerai1980 - Cardiac Muscle Mechanics Energetics Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_panerai_1980_panerai1980_model",
      "alias": "physiology_cellml_panerai_1980_panerai1980_model",
      "parameters": {
        "model_path": "data/panerai_1980.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_panerai_1980_panerai1980_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_panerai_1980_panerai1980_model_state"
      ],
      "from": "physiology_cellml_panerai_1980_panerai1980_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_panerai_1980_panerai1980_model_summary"
      ],
      "from": "physiology_cellml_panerai_1980_panerai1980_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_panerai_1980_panerai1980_model_trajectory"
      ],
      "from": "physiology_cellml_panerai_1980_panerai1980_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_panerai_1980_panerai1980_model_variable_labels"
      ],
      "from": "physiology_cellml_panerai_1980_panerai1980_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Panerai, 1980. Public controls and outputs are mapped to real source symbols for electrophysiology.",
  "schema_version": "2.0"
}

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