Marhl2000 - Mathematical Oscillations Role Mitochondria Cytosolic Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_ca_cyt",
        "label": "Initial Ca Cyt",
        "maps_to": "physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model.initial_ca_cyt",
        "description": "Initial value for Ca Cyt. Maps to source symbol `Ca_cyt`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "micromolar"
        ]
      },
      {
        "name": "initial_ca_er",
        "label": "Initial Ca Er",
        "maps_to": "physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model.initial_ca_er",
        "description": "Initial value for Ca Er. Maps to source symbol `Ca_ER`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "micromolar"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model.variable_labels"
      },
      {
        "name": "j_pump",
        "label": "J Pump",
        "maps_to": "physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model.j_pump",
        "description": "J Pump. Maps to source symbol `J_pump`. Units: flux. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "k_pump",
        "label": "K Pump",
        "maps_to": "physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model.k_pump",
        "description": "K Pump. Maps to source symbol `k_pump`. Units: first_order_rate_constant. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "ca_cyt",
        "label": "Ca Cyt",
        "maps_to": "physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model.ca_cyt",
        "description": "Ca Cyt. Maps to source symbol `Ca_cyt`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "ca_er",
        "label": "Ca Er",
        "maps_to": "physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model.ca_er",
        "description": "Ca Er. Maps to source symbol `Ca_ER`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "ca_m",
        "label": "Ca M",
        "maps_to": "physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model.ca_m",
        "description": "Ca M. Maps to source symbol `Ca_m`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "beta_er",
        "label": "Beta Er",
        "maps_to": "physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model.beta_er",
        "description": "Beta Er. Maps to source symbol `beta_ER`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Marhl2000 - Mathematical Oscillations Role Mitochondria Cytosolic Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model",
      "alias": "physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model",
      "parameters": {
        "model_path": "data/marhl_haberichter_brumen_heinrich_2000.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model_state"
      ],
      "from": "physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model_summary"
      ],
      "from": "physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model_trajectory"
      ],
      "from": "physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model_variable_labels"
      ],
      "from": "physiology_cellml_marhl_haberichter_brumen_heinrich_2000_marhlhaberichterbrumenheinrich2000_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Marhl, Haberichter, Brumen, Heinrich, 2000. Public controls and outputs are mapped to real source symbols for calcium handling.",
  "schema_version": "2.0"
}