About lab
This model is from the article: Root gravitropism is regulated by a transient lateral auxin gradient controlled by a tipping-point mechanism. Band LR, Wells DM, Larrieu A, Sun J, Middleton AM, French.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packageband2012-dii-venus-reducedmodel
Created2026-05-17
Updated2026-06-13
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother
Manifest
{
"io": {
"inputs": [
{
"name": "initial_venus",
"label": "Initial Venus",
"maps_to": "systemsbiology_sbml_band2012_dii_venus_reducedmodel_biomd0000000414_model.initial_venus",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `VENUS`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_band2012_dii_venus_reducedmodel_biomd0000000414_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_band2012_dii_venus_reducedmodel_biomd0000000414_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_band2012_dii_venus_reducedmodel_biomd0000000414_model.species_labels"
},
{
"name": "venus",
"maps_to": "systemsbiology_sbml_band2012_dii_venus_reducedmodel_biomd0000000414_model.venus"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Band2012 Dii Venus Reducedmodel Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_band2012_dii_venus_reducedmodel_biomd0000000414_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_band2012_dii_venus_reducedmodel_biomd0000000414_model_state"
],
"from": "systemsbiology_sbml_band2012_dii_venus_reducedmodel_biomd0000000414_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_band2012_dii_venus_reducedmodel_biomd0000000414_model_summary"
],
"from": "systemsbiology_sbml_band2012_dii_venus_reducedmodel_biomd0000000414_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_band2012_dii_venus_reducedmodel_biomd0000000414_model_species_labels"
],
"from": "systemsbiology_sbml_band2012_dii_venus_reducedmodel_biomd0000000414_model.species_labels"
}
],
"package": "band2012-dii-venus-reducedmodel",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": "This model is from the article: Root gravitropism is regulated by a transient lateral auxin gradient controlled by a tipping-point mechanism. Band LR, Wells DM, Larrieu A, Sun J, Middleton AM, French.",
"schema_version": "2.0"
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