Geci2022 Gene-Drive Suppression Lab

{
  "io": {
    "inputs": [
      {
        "name": "net_reproduction_rate",
        "maps_to": "ecology_geci2022_gene_drive_suppression.net_reproduction_rate"
      },
      {
        "name": "juvenile_survival",
        "maps_to": "ecology_geci2022_gene_drive_suppression.juvenile_survival"
      },
      {
        "name": "initial_population",
        "maps_to": "ecology_geci2022_gene_drive_suppression.initial_population"
      },
      {
        "name": "release_size",
        "maps_to": "ecology_geci2022_gene_drive_suppression.release_size"
      },
      {
        "name": "homing_efficiency",
        "maps_to": "ecology_geci2022_gene_drive_suppression.homing_efficiency"
      },
      {
        "name": "editing_efficiency",
        "maps_to": "ecology_geci2022_gene_drive_suppression.editing_efficiency"
      },
      {
        "name": "shredding_efficiency",
        "maps_to": "ecology_geci2022_gene_drive_suppression.shredding_efficiency"
      },
      {
        "name": "copy_mutation_rate",
        "maps_to": "ecology_geci2022_gene_drive_suppression.copy_mutation_rate"
      },
      {
        "name": "background_mutation_rate",
        "maps_to": "ecology_geci2022_gene_drive_suppression.background_mutation_rate"
      },
      {
        "name": "editing_resistance_rate",
        "maps_to": "ecology_geci2022_gene_drive_suppression.editing_resistance_rate"
      },
      {
        "name": "shredding_resistance_rate",
        "maps_to": "ecology_geci2022_gene_drive_suppression.shredding_resistance_rate"
      },
      {
        "name": "homing_resistance_rate",
        "maps_to": "ecology_geci2022_gene_drive_suppression.homing_resistance_rate"
      },
      {
        "name": "fitness_cost_cas9",
        "maps_to": "ecology_geci2022_gene_drive_suppression.fitness_cost_cas9"
      },
      {
        "name": "fitness_cost_grna",
        "maps_to": "ecology_geci2022_gene_drive_suppression.fitness_cost_grna"
      },
      {
        "name": "fitness_cost_shredder",
        "maps_to": "ecology_geci2022_gene_drive_suppression.fitness_cost_shredder"
      },
      {
        "name": "fitness_cost_nuclease",
        "maps_to": "ecology_geci2022_gene_drive_suppression.fitness_cost_nuclease"
      },
      {
        "name": "fitness_cost_shredder_activity",
        "maps_to": "ecology_geci2022_gene_drive_suppression.fitness_cost_shredder_activity"
      },
      {
        "name": "fitness_cost_edited_female",
        "maps_to": "ecology_geci2022_gene_drive_suppression.fitness_cost_edited_female"
      },
      {
        "name": "fitness_cost_edited_male",
        "maps_to": "ecology_geci2022_gene_drive_suppression.fitness_cost_edited_male"
      },
      {
        "name": "dominance_editing",
        "maps_to": "ecology_geci2022_gene_drive_suppression.dominance_editing"
      },
      {
        "name": "dominance_shredder",
        "maps_to": "ecology_geci2022_gene_drive_suppression.dominance_shredder"
      },
      {
        "name": "dominance_shredder_gamete",
        "maps_to": "ecology_geci2022_gene_drive_suppression.dominance_shredder_gamete"
      },
      {
        "name": "cas9_cofactor",
        "maps_to": "ecology_geci2022_gene_drive_suppression.cas9_cofactor"
      },
      {
        "name": "recombination_rate",
        "maps_to": "ecology_geci2022_gene_drive_suppression.recombination_rate"
      }
    ],
    "outputs": [
      {
        "name": "population_state",
        "maps_to": "ecology_geci2022_gene_drive_suppression.population_state"
      },
      {
        "name": "gene_drive_metrics",
        "maps_to": "ecology_geci2022_gene_drive_suppression.gene_drive_metrics"
      }
    ]
  },
  "title": "Geci2022 Gene-Drive Suppression Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "ecology_geci2022_gene_drive_suppression"
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation",
      "parameters": {
        "integration_step": 1
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.ecology_geci2022_gene_drive_suppression_visualisation_payload"
      ],
      "from": "ecology_geci2022_gene_drive_suppression.visualisation_payload"
    }
  ],
  "package": "ecology-geci2022-gene-drive-suppression-lab",
  "runtime": {
    "duration": 100,
    "initial_inputs": {},
    "communication_step": 10
  },
  "version": "1.0.1",
  "description": "Multi-model lab with an embedded visualisation sibling for the Geci2022 mosquito gene-drive suppression model. Tracks 1071 genotypes across Y-linked editor, X-shredder, and autosomal homing components with discrete-generation dynamics.",
  "schema_version": "2.0"
}