About lab
immunotherapy offers a better prognosis for pancreatic cancer patients. As a direct extension of this work, various new therapy methods that are under exploration and clinical trials could be assessed.
Runtime
Duration10
Comms Step1
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Metadata
Packageli2016-model-for-pancreatic-cancer-patients-receiving-immunother
Created2026-05-16
Updated2026-05-16
biomodels_ebicurateddrug-responsefaithfulimmunologyimmunotherapymicroenvironmentoncologypharmacologyphysiologysbmlsystemsbiologytumor-growthvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_pancreatic_cancer_cells_c",
"label": "Pancreatic cancer cells (C)",
"units": "native SBML value",
"default": 1000000000,
"maps_to": "oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model.initial_pancreatic_cancer_cells_c",
"description": "Initial Pancreatic cancer cells (C). Sets the initial value of bundled SBML symbol `Pancreatic_cancer_cells__C`."
},
{
"name": "initial_pancreatic_stellate_cells_p",
"label": "Pancreatic stellate cells (P)",
"units": "native SBML value",
"default": 5600000,
"maps_to": "oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model.initial_pancreatic_stellate_cells_p",
"description": "Initial Pancreatic stellate cells (P). Sets the initial value of bundled SBML symbol `Pancreatic_stellate_cells__P`."
},
{
"name": "initial_cd8_t_cells_t",
"label": "CD8+ T cells (T)",
"units": "native SBML value",
"default": 700000000,
"maps_to": "oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model.initial_cd8_t_cells_t",
"description": "Initial CD8+ T cells (T). Sets the initial value of bundled SBML symbol `CD8__T_cells__T`."
},
{
"name": "initial_nk_cells_n",
"label": "NK cells (N)",
"units": "native SBML value",
"default": 352800000,
"maps_to": "oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model.initial_nk_cells_n",
"description": "Initial NK cells (N). Sets the initial value of bundled SBML symbol `NK_cells__N`."
},
{
"name": "initial_helper_t_cells_h",
"label": "Helper T cells (H)",
"units": "native SBML value",
"default": 1881600000,
"maps_to": "oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model.initial_helper_t_cells_h",
"description": "Initial Helper T cells (H). Sets the initial value of bundled SBML symbol `helper_T_cells__H`."
}
],
"outputs": [
{
"name": "pancreatic_cancer_cells_c",
"maps_to": "oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model.pancreatic_cancer_cells_c",
"description": "Pancreatic cancer cells (C) observable. Maps to SBML symbol `Pancreatic_cancer_cells__C`."
},
{
"name": "pancreatic_stellate_cells_p",
"maps_to": "oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model.pancreatic_stellate_cells_p",
"description": "Pancreatic stellate cells (P) observable. Maps to SBML symbol `Pancreatic_stellate_cells__P`."
},
{
"name": "cd8_t_cells_t",
"maps_to": "oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model.cd8_t_cells_t",
"description": "CD8+ T cells (T) observable. Maps to SBML symbol `CD8__T_cells__T`."
},
{
"name": "nk_cells_n",
"maps_to": "oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model.nk_cells_n",
"description": "NK cells (N) observable. Maps to SBML symbol `NK_cells__N`."
},
{
"name": "helper_t_cells_h",
"maps_to": "oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model.helper_t_cells_h",
"description": "Helper T cells (H) observable. Maps to SBML symbol `helper_T_cells__H`."
},
{
"name": "state",
"maps_to": "oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model.state",
"description": "Full raw SBML observable record for reproducibility and downstream visualisation."
},
{
"name": "summary",
"maps_to": "oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model.summary",
"description": "Change and peak summary across the simulated SBML observables."
},
{
"name": "species_labels",
"maps_to": "oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model.species_labels",
"description": "Mapping from selected raw SBML observable symbols to display labels."
}
]
},
"tags": [
"biomodels_ebi",
"curated",
"drug-response",
"faithful",
"immunology",
"immunotherapy",
"microenvironment",
"oncology",
"pharmacology",
"physiology",
"sbml",
"systemsbiology",
"tumor-growth"
],
"title": "Li2016 - Model for pancreatic cancer patients receiving immunotherapy Lab",
"models": [
{
"path": "owned/models/oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model",
"alias": "oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model",
"provenance": {
"owned_path": "owned/models/oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model_state"
],
"from": "oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model.state"
},
{
"to": [
"visualisation.oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model_summary"
],
"from": "oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model.summary"
},
{
"to": [
"visualisation.oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model_species_labels"
],
"from": "oncology_sbml_li2016_model_for_pancreatic_cancer_patients_rece_biomd0000000929_model.species_labels"
}
],
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"description": "immunotherapy offers a better prognosis for pancreatic cancer patients. As a direct extension of this work, various new therapy methods that are under exploration and clinical trials could be assessed.",
"schema_version": "2.0"
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