Komarova2003 - Mathematical Predicts Critical Role Osteoclast Autocrine Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_number_of_osteoblasts",
        "label": "Initial Number Of Osteoblasts",
        "maps_to": "physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model.initial_number_of_osteoblasts",
        "description": "Initial value for Number Of Osteoblasts. Maps to source symbol `x2`. Units: cell. Naming evidence: source metadata names `x2` as `number of osteoblasts`.",
        "accepted_units": [
          "cell"
        ]
      },
      {
        "name": "initial_number_of_osteoclasts",
        "label": "Initial Number Of Osteoclasts",
        "maps_to": "physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model.initial_number_of_osteoclasts",
        "description": "Initial value for Number Of Osteoclasts. Maps to source symbol `x1`. Units: cell. Naming evidence: source metadata names `x1` as `number of osteoclasts`.",
        "accepted_units": [
          "cell"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model.variable_labels"
      },
      {
        "name": "number_of_osteoblasts",
        "label": "Number Of Osteoblasts",
        "maps_to": "physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model.number_of_osteoblasts",
        "description": "Number Of Osteoblasts. Maps to source symbol `x2`. Units: cell. Naming evidence: source metadata names `x2` as `number of osteoblasts`."
      },
      {
        "name": "number_of_osteoclasts",
        "label": "Number Of Osteoclasts",
        "maps_to": "physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model.number_of_osteoclasts",
        "description": "Number Of Osteoclasts. Maps to source symbol `x1`. Units: cell. Naming evidence: source metadata names `x1` as `number of osteoclasts`."
      },
      {
        "name": "total_bone_mass",
        "label": "Total Bone Mass",
        "maps_to": "physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model.total_bone_mass",
        "description": "Total Bone Mass. Maps to source symbol `z`. Units: percent. Naming evidence: source metadata names `z` as `total bone mass`."
      },
      {
        "name": "alpha1",
        "label": "Alpha1",
        "maps_to": "physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model.alpha1",
        "description": "Alpha1. Maps to source symbol `alpha1`. Units: flux. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "alpha2",
        "label": "Alpha2",
        "maps_to": "physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model.alpha2",
        "description": "Alpha2. Maps to source symbol `alpha2`. Units: first_order_rate_constant. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "beta1",
        "label": "Beta1",
        "maps_to": "physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model.beta1",
        "description": "Beta1. Maps to source symbol `beta1`. Units: first_order_rate_constant. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Komarova2003 - Mathematical Predicts Critical Role Osteoclast Autocrine Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model",
      "alias": "physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model",
      "parameters": {
        "model_path": "data/komarova_2003.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model_state"
      ],
      "from": "physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model_summary"
      ],
      "from": "physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model_trajectory"
      ],
      "from": "physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model_variable_labels"
      ],
      "from": "physiology_cellml_komarova_smith_dixon_sims_and_wahl_2003_komarovasmithdixonsimswahl2003_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Komarova, Smith, Dixon, Sims and Wahl, 2003. Public controls and outputs are mapped to real source symbols for bone and endocrine physiology.",
  "schema_version": "2.0"
}