Arnold2011 Zhu2009 Calvincycle Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_model_state_pi",
        "label": "Initial Model State Pi",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model.initial_model_state_pi",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Pi`."
      },
      {
        "name": "initial_model_state_pga",
        "label": "Initial Model State Pga",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model.initial_model_state_pga",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PGA`."
      },
      {
        "name": "initial_ru_bp",
        "label": "Initial Ru Bp",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model.initial_ru_bp",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `RuBP`."
      },
      {
        "name": "initial_model_state_adp",
        "label": "Initial Model State ADP",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model.initial_model_state_adp",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `ADP`."
      },
      {
        "name": "initial_model_state_atp",
        "label": "Initial Model State ATP",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model.initial_model_state_atp",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `ATP`."
      },
      {
        "name": "initial_ru5_p",
        "label": "Initial RU5 P",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model.initial_ru5_p",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Ru5P`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model.species_labels"
      },
      {
        "name": "model_state_pi",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model.model_state_pi"
      },
      {
        "name": "pga",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model.pga"
      },
      {
        "name": "ru_bp",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model.ru_bp"
      },
      {
        "name": "adp",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model.adp"
      },
      {
        "name": "atp",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model.atp"
      },
      {
        "name": "ru5_p",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model.ru5_p"
      }
    ]
  },
  "tags": [
    "metabolism",
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Arnold2011 Zhu2009 Calvincycle Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model",
      "alias": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model_state"
      ],
      "from": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model_summary"
      ],
      "from": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model_species_labels"
      ],
      "from": "systemsbiology_sbml_arnold2011_zhu2009_calvincycle_biomd0000000388_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "This model is from the article: A quantitative comparison of Calvin–Benson cycle models Anne Arnold, Zoran Nikoloski Trends in Plant Science 2011 Oct 14. It can be used to explore systemsbiology arnold2011 zhu2009 calvincycle BioModels0000000388 dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}