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Fribourg2014 - Dynamics of viral antagonism and innate immune response (H1N1 influenza A virus - NC/99) Lab

About lab

Fribourg2014 - Dynamics of viral antagonism and innate immune response (H1N1 influenza A virus - NC/99) The dynamics of the interplay between the viral antagonism and the innate immune response has be. It can be used to explore immune response dynamics and compare pathway-level behavior across conditions.

Runtime

Duration10
Comms Step1

Runs

Total0
Completed0
Failed0

Metadata

Packagefribourg2014-dynamics-of-viral-antagonism-and-innate-immune-resp
Created2026-05-15
Updated2026-05-15
immunologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_interferon_beta_mrna",
        "label": "Initial Interferon Beta mRNA",
        "units": "native source value",
        "default": 0,
        "maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model.initial_interferon_beta_mrna",
        "description": "Initial Interferon Beta mRNA. Sets the initial value of bundled SBML species `IFNb_mRNA`."
      },
      {
        "name": "initial_interferon_beta_env",
        "label": "Initial Interferon Beta Env",
        "units": "native source value",
        "default": 0,
        "maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model.initial_interferon_beta_env",
        "description": "Initial Interferon Beta Env. Sets the initial value of bundled SBML species `IFNb_env`."
      },
      {
        "name": "initial_interferon_alpha_mrna",
        "label": "Initial Interferon Alpha mRNA",
        "units": "native source value",
        "default": 0,
        "maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model.initial_interferon_alpha_mrna",
        "description": "Initial Interferon Alpha mRNA. Sets the initial value of bundled SBML species `IFNa_mRNA`."
      },
      {
        "name": "initial_interferon_alpha_env",
        "label": "Initial Interferon Alpha Env",
        "units": "native source value",
        "default": 0,
        "maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model.initial_interferon_alpha_env",
        "description": "Initial Interferon Alpha Env. Sets the initial value of bundled SBML species `IFNa_env`."
      }
    ],
    "outputs": [
      {
        "name": "interferon_beta_mrna",
        "maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model.interferon_beta_mrna"
      },
      {
        "name": "interferon_beta_env",
        "maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model.interferon_beta_env"
      },
      {
        "name": "interferon_alpha_mrna",
        "maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model.interferon_alpha_mrna"
      },
      {
        "name": "interferon_alpha_env",
        "maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model.interferon_alpha_env"
      },
      {
        "name": "unresolved_infection_observable_1",
        "maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model.unresolved_infection_observable_1"
      },
      {
        "name": "state",
        "maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model.state"
      },
      {
        "name": "summary",
        "maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model.species_labels"
      }
    ]
  },
  "title": "Fribourg2014 - Dynamics of viral antagonism and innate immune response (H1N1 influenza A virus - NC/99) Lab",
  "models": [
    {
      "path": "owned/models/immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model",
      "alias": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model",
      "provenance": {
        "owned_path": "owned/models/immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model_state"
      ],
      "from": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model.state"
    },
    {
      "to": [
        "visualisation.immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model_summary"
      ],
      "from": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model.summary"
    },
    {
      "to": [
        "visualisation.immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model_species_labels"
      ],
      "from": "immunology_sbml_fribourg2014_dynamics_of_viral_antagonism_and_in_biomd0000000529_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "Fribourg2014 - Dynamics of viral antagonism and innate immune response (H1N1 influenza A virus - NC/99) The dynamics of the interplay between the viral antagonism and the innate immune response has be. It can be used to explore immune response dynamics and compare pathway-level behavior across conditions.",
  "schema_version": "2.0"
}

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