BiosimulantBiosimulant
Docs
Search labs...
Sign inGet Started

Mcallister1975 - Mc Allister Noble Tsien Purkinje Fibre Lab

About lab

Source-faithful physiology lab for Mcallister, Noble, Tsien, 1975. Public controls and outputs are mapped to real source symbols for electrophysiology.

Runtime

Duration0.01
Comms Step0.01
Settle Steps1

Runs

Total0
Completed0
Failed0

Metadata

Packagemcallister1975-mc-allister-noble-tsien-purkinje-fibre-lab
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_membrane_voltage",
        "label": "Initial Membrane Voltage",
        "maps_to": "physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model.initial_membrane_voltage",
        "description": "Initial value for Membrane Voltage. Maps to source symbol `V`. Units: millivolt. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "millivolt"
        ]
      },
      {
        "name": "initial_sodium_h_gate",
        "label": "Initial Sodium H Gate",
        "maps_to": "physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model.initial_sodium_h_gate",
        "description": "Initial value for Sodium H Gate. Maps to source symbol `h`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "dimensionless"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model.variable_labels"
      },
      {
        "name": "membrane_voltage",
        "label": "Membrane Voltage",
        "maps_to": "physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model.membrane_voltage",
        "description": "Membrane Voltage. Maps to source symbol `V`. Units: millivolt. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "sodium_h_gate",
        "label": "Sodium H Gate",
        "maps_to": "physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model.sodium_h_gate",
        "description": "Sodium H Gate. Maps to source symbol `h`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "sodium_m_gate",
        "label": "Sodium M Gate",
        "maps_to": "physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model.sodium_m_gate",
        "description": "Sodium M Gate. Maps to source symbol `m`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "pacemaker_potassium_current_s_gate_s",
        "label": "Pacemaker Potassium Current S Gate S",
        "maps_to": "physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model.pacemaker_potassium_current_s_gate_s",
        "description": "Pacemaker Potassium Current S Gate S. Maps to source symbol `s`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "plateau_potassium_current1_x1_gate_x1",
        "label": "Plateau Potassium Current1 X1 Gate X1",
        "maps_to": "physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model.plateau_potassium_current1_x1_gate_x1",
        "description": "Plateau Potassium Current1 X1 Gate X1. Maps to source symbol `x1`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "plateau_potassium_current2_x2_gate_x2",
        "label": "Plateau Potassium Current2 X2 Gate X2",
        "maps_to": "physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model.plateau_potassium_current2_x2_gate_x2",
        "description": "Plateau Potassium Current2 X2 Gate X2. Maps to source symbol `x2`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Mcallister1975 - Mc Allister Noble Tsien Purkinje Fibre Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model",
      "alias": "physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model",
      "parameters": {
        "model_path": "data/mcallister_noble_tsien_1975_a.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model_state"
      ],
      "from": "physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model_summary"
      ],
      "from": "physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model_trajectory"
      ],
      "from": "physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model_variable_labels"
      ],
      "from": "physiology_cellml_mcallister_noble_tsien_1975_mcallisternobletsien1975_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Mcallister, Noble, Tsien, 1975. Public controls and outputs are mapped to real source symbols for electrophysiology.",
  "schema_version": "2.0"
}

Sign in to start your own run. Public-lab history stays visible here.

Select a run from History to view its results.