Arnold2011 Zhu2007 Calvincycle Starch Sucrose Photorespiration Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_gl_uc",
        "label": "Initial Gl Uc",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model.initial_gl_uc",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `GLUc`."
      },
      {
        "name": "initial_se_rc",
        "label": "Initial Se Rc",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model.initial_se_rc",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `SERc`."
      },
      {
        "name": "initial_he_pc",
        "label": "Initial He Pc",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model.initial_he_pc",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `HePc`."
      },
      {
        "name": "initial_pi_tc",
        "label": "Initial Pi Tc",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model.initial_pi_tc",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PiTc`."
      },
      {
        "name": "initial_model_state_pic",
        "label": "Initial Model State Pic",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model.initial_model_state_pic",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Pic`."
      },
      {
        "name": "initial_g6_pc",
        "label": "Initial G6 Pc",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model.initial_g6_pc",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `G6Pc`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model.species_labels"
      },
      {
        "name": "gl_uc",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model.gl_uc"
      },
      {
        "name": "se_rc",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model.se_rc"
      },
      {
        "name": "he_pc",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model.he_pc"
      },
      {
        "name": "pi_tc",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model.pi_tc"
      },
      {
        "name": "pic",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model.pic"
      },
      {
        "name": "g6_pc",
        "maps_to": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model.g6_pc"
      }
    ]
  },
  "tags": [
    "metabolism",
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Arnold2011 Zhu2007 Calvincycle Starch Sucrose Photorespiration Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model",
      "alias": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model_state"
      ],
      "from": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model_summary"
      ],
      "from": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model_species_labels"
      ],
      "from": "systemsbiology_sbml_arnold2011_zhu2007_calvincycle_starch_sucrose_ph_biomd0000000393_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "This model is from the article: A quantitative comparison of Calvin–Benson cycle models Anne Arnold, Zoran Nikoloski Trends in Plant Science 2011 Oct 14. It can be used to explore systemsbiology arnold2011 zhu2007 calvincycle starch sucrose dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}