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Dallepezze2016 Activation Of Ampk And Mtor By Amino Acids 2 Lab

About lab

DallePezze2016 - Activation of AMPK and mTORby amino acids (Model 1) This model is as described inSupplementary Software 2 of the reference publication: SBMLmodel including only the canonical amino ac. It can be used to explore systemsbiology dallepezze2016 activation of ampk and dynamics and compare simulation behavior across conditions.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagedallepezze2016-activation-of-ampk-and-mtor-by-amino-acids-2-lab
Created2026-05-17
Updated2026-05-17
signalingsystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "ir_beta_phos_by_insulin",
        "label": "Ir Beta Phos By Insulin",
        "maps_to": "systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model.ir_beta_phos_by_insulin",
        "description": "Source parameter exposed because its SBML label indicates a boundary, stimulus, dose, ligand, protocol, substrate, or environmental control. Maps to SBML symbol `IR_beta_phos_by_Insulin`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model.species_labels"
      },
      {
        "name": "p70_s6_k",
        "maps_to": "systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model.p70_s6_k"
      },
      {
        "name": "m_torc2",
        "maps_to": "systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model.m_torc2"
      },
      {
        "name": "m_torc1",
        "maps_to": "systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model.m_torc1"
      },
      {
        "name": "tsc1_tsc2",
        "maps_to": "systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model.tsc1_tsc2"
      },
      {
        "name": "pi3_k_variant",
        "maps_to": "systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model.pi3_k_variant"
      },
      {
        "name": "pi3_k_pdk1",
        "maps_to": "systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model.pi3_k_pdk1"
      }
    ]
  },
  "tags": [
    "signaling",
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Dallepezze2016 Activation Of Ampk And Mtor By Amino Acids 2 Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model",
      "alias": "systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model_state"
      ],
      "from": "systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model_summary"
      ],
      "from": "systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model_species_labels"
      ],
      "from": "systemsbiology_sbml_dallepezze2016_activation_of_ampk_and_mtor_by_am_model1705030000_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "DallePezze2016 - Activation of AMPK and mTORby amino acids (Model 1) This model is as described inSupplementary Software 2 of the reference publication: SBMLmodel including only the canonical amino ac. It can be used to explore systemsbiology dallepezze2016 activation of ampk and dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

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