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Mol2013 - Leishmania macrophage signaling network Lab

About lab

Created by The MathWorks, Inc. It can be used to explore immune response dynamics and compare pathway-level behavior across conditions.

Runtime

Duration10
Comms Step1

Runs

Total0
Completed0
Failed0

Metadata

Packagemol2013-leishmania-macrophage-signaling-network-lab
Created2026-05-15
Updated2026-05-15
immunologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_unresolved_infection_observable_1",
        "label": "Initial Unresolved Infection Observable 1",
        "units": "MWBUILTINPREFIX_nano_MWBUILTINUNIT_mole",
        "default": 0.9,
        "maps_to": "immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model.initial_unresolved_infection_observable_1",
        "description": "Initial Unresolved Infection Observable 1. Sets the initial value of bundled SBML species `mw68f058f9_e632_469e_a51e_b0641d5ac5f1`."
      },
      {
        "name": "initial_unresolved_infection_observable_2",
        "label": "Initial Unresolved Infection Observable 2",
        "units": "MWBUILTINPREFIX_nano_MWBUILTINUNIT_mole",
        "default": 0.38,
        "maps_to": "immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model.initial_unresolved_infection_observable_2",
        "description": "Initial Unresolved Infection Observable 2. Sets the initial value of bundled SBML species `mw589e86be_36cb_41e1_bccf_93824d618644`."
      },
      {
        "name": "initial_unresolved_infection_observable_3",
        "label": "Initial Unresolved Infection Observable 3",
        "units": "MWBUILTINPREFIX_nano_MWBUILTINUNIT_mole",
        "default": 0.56,
        "maps_to": "immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model.initial_unresolved_infection_observable_3",
        "description": "Initial Unresolved Infection Observable 3. Sets the initial value of bundled SBML species `mw389efde0_d330_42e0_b68c_cb0cfbf8a3c9`."
      },
      {
        "name": "initial_irak4_irak1_complex",
        "label": "Initial Irak4 Irak1 Complex",
        "units": "MWBUILTINPREFIX_nano_MWBUILTINUNIT_mole",
        "default": 0.6,
        "maps_to": "immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model.initial_irak4_irak1_complex",
        "description": "Initial Irak4 Irak1 Complex. Sets the initial value of bundled SBML species `mw86470798_a991_412f_a9bb_574001df871d`."
      },
      {
        "name": "initial_tumor_necrosis_factor",
        "label": "Initial Tumor Necrosis Factor",
        "units": "MWBUILTINPREFIX_nano_MWBUILTINUNIT_mole",
        "default": 0.8,
        "maps_to": "immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model.initial_tumor_necrosis_factor",
        "description": "Initial Tumor Necrosis Factor. Sets the initial value of bundled SBML species `mw4535fcdd_0cf2_4ee4_8d52_eadd3c4fec92`."
      }
    ],
    "outputs": [
      {
        "name": "unresolved_infection_observable_1",
        "maps_to": "immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model.unresolved_infection_observable_1"
      },
      {
        "name": "unresolved_infection_observable_2",
        "maps_to": "immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model.unresolved_infection_observable_2"
      },
      {
        "name": "unresolved_infection_observable_3",
        "maps_to": "immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model.unresolved_infection_observable_3"
      },
      {
        "name": "irak4_irak1_complex",
        "maps_to": "immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model.irak4_irak1_complex"
      },
      {
        "name": "tumor_necrosis_factor",
        "maps_to": "immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model.tumor_necrosis_factor"
      },
      {
        "name": "state",
        "maps_to": "immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model.state"
      },
      {
        "name": "summary",
        "maps_to": "immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model.species_labels"
      }
    ]
  },
  "title": "Mol2013 - Leishmania macrophage signaling network Lab",
  "models": [
    {
      "path": "owned/models/immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model",
      "alias": "immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model",
      "provenance": {
        "owned_path": "owned/models/immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model_state"
      ],
      "from": "immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model.state"
    },
    {
      "to": [
        "visualisation.immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model_summary"
      ],
      "from": "immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model.summary"
    },
    {
      "to": [
        "visualisation.immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model_species_labels"
      ],
      "from": "immunology_sbml_mol2013_leishmania_macrophage_signaling_network_model1203220000_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "Created by The MathWorks, Inc. It can be used to explore immune response dynamics and compare pathway-level behavior across conditions.",
  "schema_version": "2.0"
}

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