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Liu2012-Hybrid modeling and simulation of stochastic effects on progression through the eukaryotic cell cycle. Lab

About lab

Single-model lab wrapper for Liu2012-Hybrid modeling and simulation of stochastic effects on progression through the eukaryotic cell cycle.. The eukaryotic cell cycle is regulated by a complicated chemical reaction network. Although many deterministic models have been proposed, stochastic models are desired to capture noise in the cell res.

Runtime

Duration10
Comms Step1

Runs

Total0
Completed0
Failed0

Metadata

Packageliu2012-hybrid-modeling-and-simulation-of-stochastic-effects-on
Created2026-05-15
Updated2026-05-15
cellcyclesbmlbiomodels_ebifaithfulvisualisation

Manifest

{
  "io": {
    "inputs": [],
    "outputs": [
      {
        "name": "model_state_x_x",
        "label": "Model state X (X)",
        "maps_to": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_x_x",
        "description": "Tracks Model state X (X) in the lab model via `cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_x_x`."
      },
      {
        "name": "model_state_v_v",
        "label": "Model state V (V)",
        "maps_to": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_v_v",
        "description": "Tracks Model state V (V) in the lab model via `cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_v_v`."
      },
      {
        "name": "model_state_y_y",
        "label": "Model state Y (Y)",
        "maps_to": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_y_y",
        "description": "Tracks Model state Y (Y) in the lab model via `cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_y_y`."
      },
      {
        "name": "model_state_z_z",
        "label": "Model state Z (Z)",
        "maps_to": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_z_z",
        "description": "Tracks Model state Z (Z) in the lab model via `cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_z_z`."
      },
      {
        "name": "model_state_yt",
        "label": "Model state YT",
        "maps_to": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_yt",
        "description": "Tracks Model state YT in the lab model via `cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_yt`."
      },
      {
        "name": "model_state_mx",
        "label": "Model state Mx",
        "maps_to": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_mx",
        "description": "Tracks Model state Mx in the lab model via `cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_mx`."
      },
      {
        "name": "model_state_my",
        "label": "Model state My",
        "maps_to": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_my",
        "description": "Tracks Model state My in the lab model via `cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_my`."
      },
      {
        "name": "model_state_mz",
        "label": "Model state Mz",
        "maps_to": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_mz",
        "description": "Tracks Model state Mz in the lab model via `cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.model_state_mz`."
      }
    ]
  },
  "title": "Liu2012-Hybrid modeling and simulation of stochastic effects on progression through the eukaryotic cell cycle. Lab",
  "models": [
    {
      "path": "owned/models/cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model",
      "alias": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model",
      "provenance": {
        "owned_path": "owned/models/cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model_state"
      ],
      "from": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.state"
    },
    {
      "to": [
        "visualisation.cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model_summary"
      ],
      "from": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.summary"
    },
    {
      "to": [
        "visualisation.cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model_species_labels"
      ],
      "from": "cellcycle_sbml_liu2012_hybrid_modeling_and_simulation_of_stocha_model2004140002_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "Single-model lab wrapper for Liu2012-Hybrid modeling and simulation of stochastic effects on progression through the eukaryotic cell cycle.. The eukaryotic cell cycle is regulated by a complicated chemical reaction network. Although many deterministic models have been proposed, stochastic models are desired to capture noise in the cell res.",
  "schema_version": "2.0"
}

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